Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03716 ATGTGTTTAGATGAAGGGTTGTGGAGAAAAGCATTTATTTTTTTAATAGGCCCTTGTGGTGAGAAATGGAAAGTGAGTATTTTGAAGGAAGGAAATGAGTTATATATGCAAAATGGTTGGAAAAAGTTTATGAAAGATAACTCAGTGGTGCATGATGAGTTCTTGCTTTTCACATATGGAGAAAAGAGATTTCAGGTGCAAATTTTTGGGAAGAATGGAATTGAGAGACCATGTGTCAAGAAAGAACAAGTACAAGAAGAACAAAAAGTTGCACCAATTGTGGCCAAGAAAAAGAGGGGTAGACCAAGAAAAATTCATATTCCTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGGCCTGGGCCCAAGTGA 408 0.3137 MCLDEGLWRKAFIFLIGPCGEKWKVSILKEGNELYMQNGWKKFMKDNSVVHDEFLLFTYGEKRFQVQIFGKNGIERPCVKKEQVQEEQKVAPIVAKKKRGRPRKIHIPXXXXXXXXXXXXXXXXXXXXXXRPGPK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03716 135 CDD B3_DNA 13 69 IPR003340 GO:0003677
Car06g03716 135 PANTHER B3 DOMAIN-CONTAINING 7 90 - -
Car06g03716 135 Gene3D - 4 74 IPR015300 -
Car06g03716 135 Coils Coil 131 131 - -
Car06g03716 135 ProSiteProfiles B3 DNA-binding domain profile. 1 72 IPR003340 GO:0003677
Car06g03716 135 SUPERFAMILY DNA-binding pseudobarrel domain 9 73 IPR015300 -
Car06g03716 135 Pfam B3 DNA binding domain 17 71 IPR003340 GO:0003677
Car06g03716 135 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0625400-RELATED 7 90 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03716 14 89 REM Transcription Factor Family AT3G06220 31.646 4.69e-10 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car06g03716 B3 1.2e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03716 - - cam:101507121 222.631