Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car06g03711 | ATGCCTAACATGGCTTCCCCTCTGCTTCTTCCACTTTATTCAACTTGTGGTAAAATTCCCTCTCTTGCTGCTCCTCAAGGCATTTCTGTTGAGAAACTTGGAAGATTTGTTCTTAAAGTGAAGTCCTCAGAAACAAAGGAATGCACTGCTAATGCTACATTTAATACCAATTCACGTAGAGACTTTCTTGGTTTAGCATTAGGAGGAGTTTCTACCTTCTTCATCCATTCATTTGATGCTGCTAATGGAGCTGGTTTGCCACCAGAGGAAAAGCCAAAATTATGTGACAACAATTGTGAGAAAGAGCTTGAAAATGTACCTATGGTAACTACTGAATCAGGTTTGCAATACAAGGATATTAAAGTTGGGCAAGGCCCTAGTCCACCAGTTGGATTTCAGGTGGCTGCTAATTATGTTGCGATGGTTCCATCTGGACAAATATTTGATAGTTCATTGGAGAAAGGCCAGATTTACATTTTCCGCGTTGGATCTGGTCAGGTGATAAAAGGACTCGATGAAGGTCTTTTGAGCATGAAAGTAGGAGGGAAACGTCGGCTGTACATACCTGGATCATTGGCATTCCCAAAAGGCCTTAATTCTGCTCCAGGAAGACCAAGGGTGGCTCCAAACAGTCCAGTTATATTTGATGTAAGTTTGGAATATGTACCTGGACTTGAGTTCGATGAGGAATCAAGTTAG | 699 | 0.4163 | MPNMASPLLLPLYSTCGKIPSLAAPQGISVEKLGRFVLKVKSSETKECTANATFNTNSRRDFLGLALGGVSTFFIHSFDAANGAGLPPEEKPKLCDNNCEKELENVPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGQIYIFRVGSGQVIKGLDEGLLSMKVGGKRRLYIPGSLAFPKGLNSAPGRPRVAPNSPVIFDVSLEYVPGLEFDEESS | 232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car06g03711 | 232 | SUPERFAMILY | FKBP-like | 100 | 219 | - | - | |
| Car06g03711 | 232 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 131 | 223 | IPR001179 | GO:0003755 | |
| Car06g03711 | 232 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-3, CHLOROPLASTIC | 31 | 230 | - | - | |
| Car06g03711 | 232 | Gene3D | - | 88 | 220 | IPR046357 | GO:0003755 | |
| Car06g03711 | 232 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 131 | 219 | IPR001179 | GO:0003755 | |
| Car06g03711 | 232 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 31 | 230 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car06g03711 | Car-Chr6 | 68832686 | 68835759 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Car06g03711 | 112 | 219 | Calmodulin-binding Proteins | AT3G25230 | 36.697 | 1.54e-12 | 64.7 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car06g03711 | K01802 | - | gmx:100818743 | 372.859 |