Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03708 ATGGAAGACCAATTTTCCTCTACGGAGAAAGGAATTGGCTTTTGGACACCATTGGATGTTGGAATGAAAAGTTCAACAACTTCAGAGGATATGTTTAACAACATCTCTGAGCTTATGAACTTTGATACTTATGCTGGTTGGTGCAATGGTTCATCATCAGTGAATGATCATGATCATAGTTTGGTTCATGAGTTTTCATCATTTGCATCAATACCATATTCACCACATGATGGATTGAATTTAGTGGAACACATTAATGGTCCATTCTTTATGACAGAAATTGGTGGTGGAAATTACAATGATATGGATAACTCCACTAGTTATGGTGGAAATTACCAACTTGAATTCTTAGATACTAATAATTCAAATGAAACAAATAATTCAGATTCACAGCAAGGACAAAATGGTTCATTTCAGTTACTTAATAGTAATAACTCATCAGATATGTGCAATTACTTGATACCCAAGTCACCTAGTTGGTCACTTGATGAAAGAATGATGAGTGCTTTGTCCTTCTTTAAGGAATCAGCTGGTGAGGGCATATTAGCACAAGTTTGGGTACCTGTTAAGTATGGTGATGAATTCATCTTAACCACAAGTGATCAACCATATTTACTAGACCAAAAGCTTGCAGGGTACCGCGAAGTGTCGAGGTTGTTTACGTTTTCTGCAGAAATGAAAATGGGGTCTTGTCCTGGTCTTCCCGGTCGCGTGTTTATCTCGCATGTTCCTGAATGGACCTCTAATGTTGGTTACTACCATAAATCTGAGTATTTGAGATTAGAGCATGCGATTAGTCACGACGTTCGCGGATCGATTGCTCTTCCTATATCTGACATGCTCTCTGAAGTTTCATGTAGTGCTGTACTAGAACTTGTCACTACAAAGGAAAAGCTTAATTTTGACAAAGAGTTAGAATTTGTTTCTCATGCACTTCAGCGTGTGAATTTAAGGACTATTATGCCTCCAAGACTTCTTCCTCAGTGTGTATCAATTAACAAAAGAGCTGCTTTAACAGAGATAATTGATGTGTTAAGAGCTGTTTGTCATGCACATAGATTGCCGCTAGCATTGACATGGATTCCATGTTGTTATAGCGAAGGAAAAGGAGAAGAATCCGAGAGAATCCGAATTAAAGAAGGCCATACAAGTTCGGATGAAAAATGTGTACTATGTATTGAAGAATCAGCTTGCTATATAAATGATAAAATGGTAGGAGGATTTGTTCATGCATGTGCTGATCATCATCTTGAGGAAGGACAAGGTATATCAGGAAAAGCTCTACAATCAAATCATCCATTCTTCTATACCGATGTGAAGGCTTATGATGTTAGCGAATATCCACTTGTTCATCACGCACGAAAATATAGCTTGAATGCTGCAGTTGCAATTAGGCTAAGGAGTACATATACTAATGATGACGATTATGTATTAGAATTCTTTCTTCCTATCAATATGACAGGAAGTTCAGAACAACAACTGTTATTAGACAATCTCTCAGATACTATGAGGAGAATTTGTAAAAGTTTGAGGACAGTTTCAGAAGCTGAACTAAGAGGGATACAAGGTTCCCAAGATGGGTTTCAAAAGGAAAATGTCTCAGGTTTTTTTTCATTGTCTAGGGGAAACTCTCAGATAGCATTTACAACTGGTGACCAAGATTTATTTCAGATGTCATTGAATGCAACTAACCTAAAAAATATTCAAGGTCATTGTCAGGCAACAAATGCACCGAGAAAGCAGATTGAGAAAAAGAGAAGTGCAGTAGAGAAAAATGTTAGCTTGAGTGTTCTCCAACAATACTTTTCTGGTAGTCTGAAAGATGCTGCAAAAAGAATTGGAGTATGTCCAACAACTCTGAAGAGGATATGCAGACAACATGGAATTTCAAGATGGCCGTCGCGCAAGATAAATAAAGTGAACCGATCGTTGAAGAAGATACAAACTGTTCTTGATTCTGTCCAAGGAGTTGAAGGAGTTCTGAAGTTTGATCCTCACACTGGTGGATTTGTAGCAGGAGGATCAATCATTCAACAAATTGGTTCACATAAAAGTCTCATGTTCCCAGAGAATTTTTTCGCTCAAGACCTCGCGCCCGCGCCTATAACAACTCGGGAACCAATCTCAGTAACTCCACCACCTTGTGAGAATTCAGCCATTAAGTTGGAGGATGGATTGAAGAAAGAAAATGCTTCTTCTGTTGATTGTATTCAAGATTCAACATCAATAACCATGCATGATGAACCATGTCAAACATCGTGGATTTGGACAAAGACTCAAGATTGTCCTAAACAAACATCTATAGGTTCTGTTTTTGAAAAACAAGATGATCAATGTGGGTTGAACAAGACTAGTTCATTCTCATTGATTGAACATGAACTTGGTGGGGACGAAAATAACCAACCTACTTCTTCAAGCATGACAGATTCATCCAATGCCTCTGGATCAATGGTTCGTCGAAGCTCATCAGGCTCTCAACAAAGCTTTGAGAATCGAAAGCGTTCGAAAATGAAATCAGTTTGTGTTGATAGTGAGTCGAAATTTGCTGTCAAAGCTAACTATAAAGGAGATACTATTCGATTCAAGTTTGATCCCTCTGTAGGTTGTTTTCGACTATATGAAGAAGTTACAACAAGGTTCAAATTACAAAATGGTTCATTTACACTCAAATATCTAGATGATGAGGAGGAATGGGTGATGTTGGTGAATGATTCTGATTTGAAGGAATGTGTGGAAATTTTGAGTGATGTTGGCACACATTGTGTGAAGTTACTTGTTCGTGATATACATGGAAGTATAGTAACTAGTAACAGTTGA 2817 0.3777 MEDQFSSTEKGIGFWTPLDVGMKSSTTSEDMFNNISELMNFDTYAGWCNGSSSVNDHDHSLVHEFSSFASIPYSPHDGLNLVEHINGPFFMTEIGGGNYNDMDNSTSYGGNYQLEFLDTNNSNETNNSDSQQGQNGSFQLLNSNNSSDMCNYLIPKSPSWSLDERMMSALSFFKESAGEGILAQVWVPVKYGDEFILTTSDQPYLLDQKLAGYREVSRLFTFSAEMKMGSCPGLPGRVFISHVPEWTSNVGYYHKSEYLRLEHAISHDVRGSIALPISDMLSEVSCSAVLELVTTKEKLNFDKELEFVSHALQRVNLRTIMPPRLLPQCVSINKRAALTEIIDVLRAVCHAHRLPLALTWIPCCYSEGKGEESERIRIKEGHTSSDEKCVLCIEESACYINDKMVGGFVHACADHHLEEGQGISGKALQSNHPFFYTDVKAYDVSEYPLVHHARKYSLNAAVAIRLRSTYTNDDDYVLEFFLPINMTGSSEQQLLLDNLSDTMRRICKSLRTVSEAELRGIQGSQDGFQKENVSGFFSLSRGNSQIAFTTGDQDLFQMSLNATNLKNIQGHCQATNAPRKQIEKKRSAVEKNVSLSVLQQYFSGSLKDAAKRIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVQGVEGVLKFDPHTGGFVAGGSIIQQIGSHKSLMFPENFFAQDLAPAPITTREPISVTPPPCENSAIKLEDGLKKENASSVDCIQDSTSITMHDEPCQTSWIWTKTQDCPKQTSIGSVFEKQDDQCGLNKTSSFSLIEHELGGDENNQPTSSSMTDSSNASGSMVRRSSSGSQQSFENRKRSKMKSVCVDSESKFAVKANYKGDTIRFKFDPSVGCFRLYEEVTTRFKLQNGSFTLKYLDDEEEWVMLVNDSDLKECVEILSDVGTHCVKLLVRDIHGSIVTSNS 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03708 938 MobiDBLite consensus disorder prediction 118 140 - -
Car06g03708 938 ProSiteProfiles RWP-RK domain profile. 579 660 IPR003035 -
Car06g03708 938 MobiDBLite consensus disorder prediction 794 836 - -
Car06g03708 938 SMART PB1_new 847 929 IPR000270 GO:0005515
Car06g03708 938 PANTHER PROTEIN NLP8 16 724 IPR045012 GO:0003700
Car06g03708 938 PANTHER PROTEIN NLP8 725 931 IPR045012 GO:0003700
Car06g03708 938 Gene3D - 843 926 - -
Car06g03708 938 ProSiteProfiles PB1 domain profile. 847 929 IPR000270 GO:0005515
Car06g03708 938 MobiDBLite consensus disorder prediction 797 830 - -
Car06g03708 938 Pfam RWP-RK domain 592 640 IPR003035 -
Car06g03708 938 Pfam PB1 domain 849 928 IPR000270 GO:0005515
Car06g03708 938 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 725 931 - -
Car06g03708 938 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 16 724 - -
Car06g03708 938 SUPERFAMILY CAD & PB1 domains 843 931 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03708 Car-Chr6 68807031 68811972 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03708 1 936 NLP Transcription Factor Family AT2G43500 47.688 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Car06g03708 PB1 7.2e-17 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03708 - - aprc:113864503 1212.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02676 01 52259186 52266908 Car06g03708 06 68807031 68811972 PCT