Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03694 atgaaAATTCAGTGTGATGTGTGTGAGAAAGCTCCTGCTACTGTGATTTGTTGTGCTGATGAAGCTGCTTTGTGTACCAAATGTGATGTTGAAGTTCATGCTGCTAATAAACTTGCTAGCAAGCATCAAAGGCTTCTTCTCAATTCTTTATCTAACAAGCTTCCCAAATGTGACATATGCCAAGATAAGGCAGCTTTCATATTTTGTGTTGAAGACAGAGCACTCTTCTGTAAGGACTGCGACGAACCGATTCACGTAGCTGGTAGTCTTTCTGCGAACCACCAGCGCTTCCTTGCGACCGGAATCCGTGTGGCTTTGGGTTCGAGTTGCGCCAAAGGTAACGAGAAAAGCCAAGTGGAACCATCAAAACCAGACACACAACAAGTTCCTGTGAAAGTTCCTTCTCAGCAAGTGCCTAGTGTTGCATCCTCTTGGGCTGTTGATTACTTATTGGAATTAAGTGACTTTGATTCGCCAGACAAAGTAAGACGACTTTATTCTGTTGATTATAATTAG 516 0.4264 MKIQCDVCEKAPATVICCADEAALCTKCDVEVHAANKLASKHQRLLLNSLSNKLPKCDICQDKAAFIFCVEDRALFCKDCDEPIHVAGSLSANHQRFLATGIRVALGSSCAKGNEKSQVEPSKPDTQQVPVKVPSQQVPSVASSWAVDYLLELSDFDSPDKVRRLYSVDYN 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03694 171 Gene3D Classic Zinc Finger 1 97 - -
Car06g03694 171 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Car06g03694 171 CDD Bbox1_BBX-like 5 44 - -
Car06g03694 171 PANTHER B-BOX ZINC FINGER PROTEIN 24 1 165 - -
Car06g03694 171 Pfam B-box zinc finger 52 95 IPR000315 GO:0008270
Car06g03694 171 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Car06g03694 171 MobiDBLite consensus disorder prediction 114 133 - -
Car06g03694 171 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Car06g03694 171 SMART bboxneu5 52 99 IPR000315 GO:0008270
Car06g03694 171 SMART bboxneu5 4 47 IPR000315 GO:0008270
Car06g03694 171 CDD Bbox1_BBX-like 56 98 - -
Car06g03694 171 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03694 Car-Chr6 68695457 68698837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03694 1 162 Orphan Transcription Factor Family AT1G06040 69.231 1.36e-73 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Car06g03694 zf-B_box 3.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03694 - - gmx:732574 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02662 01 52163295 52164919 Car06g03694 06 68695457 68698837 PCT