Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03688 ATGACATTTAGTAGGTTGCGTTATTCTTTTGGAAGAGTTATAATTTATACCCACGGTAATATAAAGCAAGTTTGGAGTCTTGGTTCCATGTCATCAATTGCAATCTCATATGGTGAAAAAGGTTCAGTTTTTTGTGGTTTGAAATCAGATGGTTCTCATACTGTGACATGTTATGGATCAAACTCAGCCATAATCTATGAAACACCAACCCATTTCTCATTTCTTGGCTTAACAGCTGGTGATGGATTTGTCTGTGGGCTTCTAATGGGTTCAAAACAACCTTATTGTTGGGGTAACAGTGGCTACATTGAAATGGGTGTGCCTCAACCTATGATTAAAGATGCTCAGTACTTAGAAATTAGTGCTGGTGATTACCATGTATGTGGGTTGAGGAAGCCTTGGAATGGAAGGCGTAGCGGTAGTGGTAGCGATAGGGATGTTTCTTTAGTTGATTGTTGGGGTTATAACATGACCAAAAACCATGTGTTTGATGGAAAGATTCAATCAATTTCAGCCGGTTCTGAATTTAACTGTGGATTGTTTTCTAAAAACAGGAGCGTTTTCTGTTGGGGTGATGAGACTAGTAATTTGGTGATTAGTTTGATTCCTCAAAAAATGAAGTTCAAAAAGATTTCTTGTGGTGGGTATCATGTGTGTGGAATCTTAGAGGGGGTGAGTTCTAGAACCTTTTGTTGGGGGAGAAGCTTGGACATTCAGAAACAAATTTCAGTGACACATAATATAGGTCAAGGAAATATTGATTTGGCTCCAAATGATCCTATGGTTTCTGTAGTGGGAGGAAGGTTCCATGCTTGTGGAATAAAAAGATATGATCATGAAGTTCTTTGTTGGGGATTTATGATCAAACCAAGCACCTCAATTCCTAGAGGGATTAAGGTTTATGAGATTGCAGCTGGTGATTATTTTACTTGTGGAGTACTTGCTGAGAAATCATCTCCAATTCCATTTTGTTGGGGTGTTGGATTTCCTACTTCTTTTCCTTTAGCTGTCTCGCCGCGAATATGCAAGCCTGCTCCATGTCCTTTCGGTTTCTATGAACTTGATCAGCAAAAGGGTCTATGTAAATCCCCAAATTCTGTTGTTTGCATGCCGTGCAGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGTATCGAAAAATTGGATGCAATTCGGTGTCTGATAGAGTGTGTGAATATAATTGTTCAGCTTGTTCTTCACCTGAATGCTACTTACACTGCTCCtcttcatattccaatattggtacagaaaagaaaaatgagaaattttgggctttgcagttacaagTGGTTATTGCAGACATTGTTTTTGCAGTTTTTGTTGTTAGTATTGTATCATTAGCAGTAGTTTTATTTGTCCGCCGCAGGATAAGAGATTGCGAGTGTTCGGCCAGATTAAAGGTGAAGAAACTAAATATAAGAAGTTCTTCCCTCCAACACGAGAACCGCAGGATCCGTCCGGACATCGAGGAGTTCAAGCTTAGGAAGGCACAAAGGTTCACTTATGAAGAACTTGAAACTGCAACATGTAGATTCAAAGAAGAATCCATAGTAGGGAAGGGAAGTTTTTCTTGTGTATTCAAAGGTGTTCTGAAAGATGGAACAGTTGTAGCTGTCAAAAGGGCTATTGTGTATCCTCCAAACAACAAGCACAAGAATTCCAAAGAGTTTCAGACTGAACTTGACTTACTCTCAAGATTGAACCATGCGCATTTGCTCAACCTTCTAGGCTATTGTGATGAAAATGGAGAAAGACTTCTAGTCTACGAGTTCATGGCTCATGGATCTTTGCATCAACACCTACATGGTCCAAACCAAGTGTTGAAACAGCAACTAAACTGGATAAGAAGGGTAACAATAGCGGTTCAAGCGGCCCGCGGGATTGAGTATTTGCACGGCTATGCTTGTCCACCAGTGATTCATAGAGACATTAAATCCTCAAACATCCTCATTGATGAAGAACACAATGCAAGAGTTTCTGATTTTGGTTTATCATTGTTAGGTCCTGCAGATAGTACTACTCCACTAGCCGAGTTACCGGCCGGAACACTTGGTTACCTTGATCCCGAATACTATAGGCTTCATTACCTCACAACAAAATCAGATGTATATAGCTTCGGCGTTCTACTATTGGAAATTATAAGTGGTAGAAAAGCCATTGACATGAAATATGAAGAAGGGATTAATAACATAGTTGAATGGTCAGTGCCTTTGATCAAATCAGGAGATATAGCTGCAATTTTGGATCCAACTCTTGAGCCACCTCATGATGTTGAAGCATTGAAAAGGATAGCTAATGTAGCTTGTAAATGTGTGAGAATGAGAGGGAAAAATAGACCTTCAATGGACAAAGTAACAACATCTTTGGAAAGAGCACTTGCAATGTTATTGGGTAGTCCATGCATTGATCAGCCAATTTTGCCTTCTGAGGTGGTTTTAGGAAGTAACAGATTGCATAAAAAAACATCTCAAAGATCTTCAAATATGTCAGTTTCTGAAAATGATTATTTGGCTGAAAATGAGGAAAACATAAGGTTTGAGGTTAGAGCACCTTCATGGATAACATTCCCTAGTGTGACATCTTCTTCTCAAAGAAGAAAGTCATCTATGTCAGAGATAGATGATGATGGGAAAATTGTGGAAGTGAAGAATATGGGAAATGTTGGAGGGAACAGTGATGTTTTGAGAAATTTAGAGGAAGAAATTGGACCTGCTTCTCCACAACAGAAGCTGTTCTTGGAACACAATTTCTAA 2811 0.375 MTFSRLRYSFGRVIIYTHGNIKQVWSLGSMSSIAISYGEKGSVFCGLKSDGSHTVTCYGSNSAIIYETPTHFSFLGLTAGDGFVCGLLMGSKQPYCWGNSGYIEMGVPQPMIKDAQYLEISAGDYHVCGLRKPWNGRRSGSGSDRDVSLVDCWGYNMTKNHVFDGKIQSISAGSEFNCGLFSKNRSVFCWGDETSNLVISLIPQKMKFKKISCGGYHVCGILEGVSSRTFCWGRSLDIQKQISVTHNIGQGNIDLAPNDPMVSVVGGRFHACGIKRYDHEVLCWGFMIKPSTSIPRGIKVYEIAAGDYFTCGVLAEKSSPIPFCWGVGFPTSFPLAVSPRICKPAPCPFGFYELDQQKGLCKSPNSVVCMPCSXXXXXXXXXXXXXXXXXXXXXXMYRKIGCNSVSDRVCEYNCSACSSPECYLHCSSSYSNIGTEKKNEKFWALQLQVVIADIVFAVFVVSIVSLAVVLFVRRRIRDCECSARLKVKKLNIRSSSLQHENRRIRPDIEEFKLRKAQRFTYEELETATCRFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIVYPPNNKHKNSKEFQTELDLLSRLNHAHLLNLLGYCDENGERLLVYEFMAHGSLHQHLHGPNQVLKQQLNWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVSDFGLSLLGPADSTTPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEIISGRKAIDMKYEEGINNIVEWSVPLIKSGDIAAILDPTLEPPHDVEALKRIANVACKCVRMRGKNRPSMDKVTTSLERALAMLLGSPCIDQPILPSEVVLGSNRLHKKTSQRSSNMSVSENDYLAENEENIRFEVRAPSWITFPSVTSSSQRRKSSMSEIDDDGKIVEVKNMGNVGGNSDVLRNLEEEIGPASPQQKLFLEHNF 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03688 936 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Car06g03688 936 SUPERFAMILY Protein kinase-like (PK-like) 510 808 IPR011009 -
Car06g03688 936 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 22 936 - -
Car06g03688 936 PANTHER RECEPTOR-LIKE KINASE 22 936 - -
Car06g03688 936 Pfam Protein tyrosine and serine/threonine kinase 534 807 IPR001245 GO:0004672|GO:0006468
Car06g03688 936 Gene3D - 77 337 IPR009091 -
Car06g03688 936 Gene3D Phosphorylase Kinase; domain 1 503 610 - -
Car06g03688 936 Gene3D Transferase(Phosphotransferase) domain 1 611 815 - -
Car06g03688 936 ProSiteProfiles Protein kinase domain profile. 531 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03688 936 SMART serkin_6 531 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03688 936 ProSitePatterns Protein kinases ATP-binding region signature. 537 559 IPR017441 GO:0005524
Car06g03688 936 SUPERFAMILY RCC1/BLIP-II 11 286 IPR009091 -
Car06g03688 936 CDD STKc_IRAK 537 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03688 Car-Chr6 68659158 68665542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03688 12 936 Receptor kinase-like Gene Family AT3G59420 63.793 0.0 1144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Car06g03688 PK_Tyr_Ser-Thr 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03688 - - gmx:100797455 1387.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03688 06 68659158 68665542 Car01g02658 01 52144176 52146889 PCT