Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03687 ATGGGACATAGTTCGAATAAGAAGAAACGAGGAGGTGGAGGACGAAGAAGCAAAGCAAGAACGCCTTCCAAAGACCACGCTTCTCAATTCGGTCAAGATGATGATAACGAACAACTTTCCGAAGAGATTACCGCACTATGTGCAATTTTTCAAGAGGATTGCAAAATTGTTCCTGGATCGCTTCCTCAACTTGCCATTAAGCTCAGGCCTTACTCGAAGGACATGGGTTATGAGGATGTGGATGTTTCTGCAATTCTTGTTGTTAGGTGCTTGCCTGGGTATCCCTTCAAGTGTCCCAAGTTGCAGATTACTCCTGAGATGGGTTTGTCAGATACTGATGCTAATAAACTTTTGTCTCTCCTCCTTGATCAGGCCAATTTAAATGCTAGGGAGGGACGAGTAATGATCTTTAATTTAGTTGAGGCAGCTCAAGAGTTTCTGTCTGGAATTGAGCCTATTGCCAAACCAACTGAATCTAAGTTTTTGCACACAACAACAGAAGGCATTGAAGAATTGTGTCCCAAGGATATTATTGCATCTTCAAATAAAAATAGATCTTTTGTTTATGGTTTCATCGACCTTTTCAGTGGCTATGGAGAGTCCTGGAATTGGGGTTTTGGAATTGATGAAACTGCTGGAAAAAGTTCTTCTCTTCCTTCCTCTAAGTTAGATGCCTCCAAGCCACGATTTGAAGCCCGGGAAAAGAAATCTGATAGCAAGGAAAACCCGTACATATTGCAAGAACTTCCTGCGAAATTAGATACTGTTGGAGAAGTTAGTGAAGACAGTAACAATATCTTATCTTTGACTCATTCAAGTAGATCTCTGGTGGAAGATTTTGTAGGGAACGACAGTGAAGGTGAGAAAGAGTATTTTATTGTTGATGAGTATGCAACAGAAGATAACAAAGGTGTGTATGACAGCGAGTCGTCAGAGTCTATATCTTCTGTCTCCTTGCCTCATCATCAAGCATCTCAAACAATAGAAAAGGATCTAATCATGGTTCACATGCTTCGCCTTGTTTGTGCTTCTAAAGGCACATTGACCGACTCTTTGCCACAATTAGCAGCAGAGCTGTACAATTTAGGGATCTTTTCTGACTTGGCACGTGATATGGCATCAAAACCGCCTTCCCTTTTCAACAAAACCTTTCATCGTATCTTCAAGAAACACCTGGCATCATCCAAAATATCTCAATTTTGGACACCTTCTTCTGATTTTGGAGGCTCTAATACAGTTCCCCACAGTTCTCGATATTTAAATGATTTTGAGGAGCTACGCCCCCTTGGTCATGGTGGTTTTGGGCATGTTGTGCTGTGCAAAAATAAGCTCGATGGAAGGCAGTATGCAATGAAGAAAATTCGCCTTAAAGACAAAAGCATGCCTGACCGAATATTAAGGGAGGTAGCTACACTTTCACGTTTACAACATCAACATGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGAGTTGCAGATTCTTATGGGGATCCTGCTTCGGGTTCAAGGACTACAATGAGCTCTACTTTCAGTTACCAAGCTGCAAGCTCCAATGATGCCATTGGGCGCGAGAATCAGCTAGAATCAACATATCTTTATATACAAATGGAGTACTGTCCCAGGACTCTTCGTCAGATGTTTGAATCATATAATCATTTTGACGAAGAACTGGCATGGCATTTGTTTCGCCAAATAGTGGAAGGTTTGGCACACATACACGGGCAAGGAATAATTCATCGGGACTTAACACCAAGTAACATATTCTTTGATGCTCGCAATGATATTAAAATTGGTGATTTTGGTCTCGCCAAGTTCTTGAAGTTGGAGCAATTGGACCAAGATCTAGCCCATCCCACTGATACAACTGGAGTTTCTATTGATGGCACTGGACAAGTTGGGACATATTTCTATACAGCTCCTGAAATTGAGCAAGGATGGCCCAAGATTGATGAAAAGGCCGACATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCACCCATTTGGGACAGCAATGGAGAGGCATGTTGTTTTATCTGATCTGAAACAGAAAGCGGAGCTTCCACCTGCTTGGGTTGCTGAGTTTCCACAACAGGAATACTTGCTGCGGCATTTAATGTCTCCAGGTCCTTCAGATCGCCCATCTGCCACAGAACTTCTGCAGAATGCATTTCCTCCACGAATGGAGTCTGAATTGTTGGATGATATCCTGCGAACAATGCAGAAGTCAGAGGATACAAGCATTTACGATAAAGTCTTAAATGCTATCTTTGATGAAGAAATGTTAAGCACAAAACACATTCGTCAGGTTGGTAGAATGGAGTCAGTGGGAGATAACAGTTCATCCATTCAGCACACAGATTTTGTAACTGAGGTCCGAGATTATGTTGTCGATGTCAACAAGGAAATTTTCAGGCATCATTGTGCTAAGCACCTAGAAATATCACCAATGCGATTAATGGATGATTGTCCACAGTTTAATAGAAATGCAGTTAAACTTCTGACCCATGGAGGAGACATGCTTGAACTTTGCCATGAGCTGCGTTTGCCTTTTGTGAACTGGATTATATCTAACCAGAAATCTTCATTCAAACGATATGAGATATCATATGTTTACAGAAGAGCAGTTGGACATTCATCACCAAACCGCCACCTTCAGGGAGATTTTGACATTATTGGTGGTACTTCAGCATTGACAGAAGCAGAGGTCATAAAGGTCACGAGGGACATAGTCACTTGTTTTTTCAATGACGACTCATGTGACATTCATCTAAACCATGCTGGCCTCCTAGGTGCAATTTGGTCATGGACTGGAATCAAGGTAGAACACAGACTTAAAGTAGCAGAGCTTCTTTCAATGATGGGTTCATTGCGTCCTCAATCCTCAGAAAGGAAATCAAAATGGGTAGTGATAAGGCGGCAACTATTGCAGGAACTGGATTTAGTAGAAGTTATGGTAAATAGGTTGCAGACTGTAGGTTTGAGATTCTGTGGATCTGCAGATCAGGCACTTCCCAGACTAAGAGGAGCTCTGCCATCTGATAAGCGTACCTTGAAGGCACTTGATGAATTGTCCGAGCTAGTCAGCCTCTTGAGAATTTGGAGGATTGACAAAAATGTATATATAGATGCATTAATGCCGCCAACTGAAAGTTATCATAGAGATTTGTTTTTTCAGGTATACTTAAGGAAGGAAAACAGTTCTGGATCACTCTCTGAAGGTGTCTTGCTAGCTGTTGGTGGTCGATATGACTATTTGCTTCATCAGTTGTGGAGTAGTGACTATAAAGGAAATTCTCCCACTGGTGTGGGGACTAGCCTTGCACTAGAGACAATAATTCAGAATTGTCCTGTCGATTTTAAGCCCAATAGAAATGAAGCCAGCATCAATATTCTTGTCTGTTCAAGAGGAGGAGGGGGTCTGTTAGTGGAGCGCATGGAACTAGTTGCTGAGTTATGGCAGGAAAACTTTAAGGCCGAATTTGTTCCCATCCCTGATCCAAGTCTCACAGAGCAGTATGAGTACGCTAATGAACATGATATCAAATGTCTTGTCATTATTACAGATACAGGTGTCTGTCTGACAGATTCAGTTAAGGTTCGACACCTTGAACTTAAGAAGGAGAAAAATATTGAGAGAGAGAACCTAGTCAAGTTTCTATCGGATGCTATGGCAACACAGTTTAGAAACCCCTCCATATGGATTTGA 3714 0.4173 MGHSSNKKKRGGGGRRSKARTPSKDHASQFGQDDDNEQLSEEITALCAIFQEDCKIVPGSLPQLAIKLRPYSKDMGYEDVDVSAILVVRCLPGYPFKCPKLQITPEMGLSDTDANKLLSLLLDQANLNAREGRVMIFNLVEAAQEFLSGIEPIAKPTESKFLHTTTEGIEELCPKDIIASSNKNRSFVYGFIDLFSGYGESWNWGFGIDETAGKSSSLPSSKLDASKPRFEAREKKSDSKENPYILQELPAKLDTVGEVSEDSNNILSLTHSSRSLVEDFVGNDSEGEKEYFIVDEYATEDNKGVYDSESSESISSVSLPHHQASQTIEKDLIMVHMLRLVCASKGTLTDSLPQLAAELYNLGIFSDLARDMASKPPSLFNKTFHRIFKKHLASSKISQFWTPSSDFGGSNTVPHSSRYLNDFEELRPLGHGGFGHVVLCKNKLDGRQYAMKKIRLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETGVADSYGDPASGSRTTMSSTFSYQAASSNDAIGRENQLESTYLYIQMEYCPRTLRQMFESYNHFDEELAWHLFRQIVEGLAHIHGQGIIHRDLTPSNIFFDARNDIKIGDFGLAKFLKLEQLDQDLAHPTDTTGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKQKAELPPAWVAEFPQQEYLLRHLMSPGPSDRPSATELLQNAFPPRMESELLDDILRTMQKSEDTSIYDKVLNAIFDEEMLSTKHIRQVGRMESVGDNSSSIQHTDFVTEVRDYVVDVNKEIFRHHCAKHLEISPMRLMDDCPQFNRNAVKLLTHGGDMLELCHELRLPFVNWIISNQKSSFKRYEISYVYRRAVGHSSPNRHLQGDFDIIGGTSALTEAEVIKVTRDIVTCFFNDDSCDIHLNHAGLLGAIWSWTGIKVEHRLKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELDLVEVMVNRLQTVGLRFCGSADQALPRLRGALPSDKRTLKALDELSELVSLLRIWRIDKNVYIDALMPPTESYHRDLFFQVYLRKENSSGSLSEGVLLAVGGRYDYLLHQLWSSDYKGNSPTGVGTSLALETIIQNCPVDFKPNRNEASINILVCSRGGGGLLVERMELVAELWQENFKAEFVPIPDPSLTEQYEYANEHDIKCLVIITDTGVCLTDSVKVRHLELKKEKNIERENLVKFLSDAMATQFRNPSIWI 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03687 1237 Pfam Anticodon binding domain of tRNAs 1131 1229 IPR024435 -
Car06g03687 1237 MobiDBLite consensus disorder prediction 213 241 - -
Car06g03687 1237 SUPERFAMILY Protein kinase-like (PK-like) 419 736 IPR011009 -
Car06g03687 1237 ProSitePatterns Tyrosine protein kinases specific active-site signature. 578 590 IPR008266 GO:0004672|GO:0006468
Car06g03687 1237 Pfam Histidyl-tRNA synthetase 875 1114 IPR041715 -
Car06g03687 1237 Gene3D Transferase(Phosphotransferase) domain 1 542 734 - -
Car06g03687 1237 MobiDBLite consensus disorder prediction 226 241 - -
Car06g03687 1237 Pfam RWD domain 37 147 IPR006575 GO:0005515
Car06g03687 1237 MobiDBLite consensus disorder prediction 1 17 - -
Car06g03687 1237 MobiDBLite consensus disorder prediction 1 35 - -
Car06g03687 1237 CDD STKc_EIF2AK4_GCN2_rpt2 416 723 - -
Car06g03687 1237 PANTHER HISTIDYL-TRNA SYNTHETASE 20 1237 - -
Car06g03687 1237 Gene3D Bira Bifunctional Protein; Domain 2 787 1121 IPR045864 -
Car06g03687 1237 SUPERFAMILY Class II aaRS ABD-related 1130 1227 - -
Car06g03687 1237 Gene3D Ubiquitin Conjugating Enzyme 28 155 IPR016135 -
Car06g03687 1237 PANTHER EIF-2-ALPHA KINASE GCN2 20 1237 - -
Car06g03687 1237 SUPERFAMILY Class II aaRS and biotin synthetases 793 1116 IPR045864 -
Car06g03687 1237 ProSitePatterns Protein kinases ATP-binding region signature. 429 452 IPR017441 GO:0005524
Car06g03687 1237 ProSiteProfiles RWD domain profile. 41 150 IPR006575 GO:0005515
Car06g03687 1237 MobiDBLite consensus disorder prediction 18 32 - -
Car06g03687 1237 Pfam Protein kinase domain 423 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03687 1237 ProSiteProfiles Protein kinase domain profile. 423 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03687 1237 SMART RWD2001b 41 150 IPR006575 GO:0005515
Car06g03687 1237 SUPERFAMILY UBC-like 35 147 IPR016135 -
Car06g03687 1237 Gene3D Phosphorylase Kinase; domain 1 411 539 - -
Car06g03687 1237 Gene3D - 1128 1227 IPR036621 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03687 Car-Chr6 68639226 68657351 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03687 423 726 MAP Kinase Kinase Kinase AT1G63700 25.478 1.59e-22 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Car06g03687 Pkinase 4.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03687 K16196 - gmx:100797996 2114.73