Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03683 ATGTATCCCAAACGGTCTAGCCAAGATGGTCCTGATTCTAGGCCAGTGCGTACAAGTGATAGGATCAAGACGAGGCCAGCTGTTTATAGCCGGGCACCATTCTTGTATTACAACTCAAATCTTAGGCGCCCCAGGAAAAACAAGAATAAGACAAGAACGGCAGCTTCGCAGATTGCTAAGATGCTGCGTCCAGGGAATCGGAAAGCACATGACTCAAATACTAATTCTGGCTCTGCCAACCTTCGGCGGTCAACCAGGGCGAGAAGGGCTAATGTAAATCTTATAGAGTTTATAGAAAGCTCTGGAGATGAGGATGCAGACTTAATGAGACCCACATATCGACCATTGAGGAACCGGATTAGCAACAGTGTCAGCCGGGACGATGTAATATCTTCTAAGCGCAAAAGAGGAGGGGAGACTAAACCAACACCTCGGCGTGAAGGTCTACGGCCTCAGTCAGATGATGATCAAGACCTTTCAGAAGAAAAGGTTGAACAAGATGAAACAGAAAATGGAAACgatgttgaggaaaatgatgcagaagatggtcataatgaaatggagggtgatgccgagggtgaagatgaaggtgaggatgacggtgatgaggatggtgatgatgaagagggtgaagaagagcaggatgGAAGAAGGCGCTATGATCTTCGAAATCGTGCAGATGTCCGCAGGTTCTCTATGGAAGAAGGGAAGGCCCGACCAAGGTCTCCTCGAAGAGTGTTACATCAAGGTATGGGAACTAAGGTCAGCAGGGACGTAAGGAAGGGTGGATCGCGAGTTCACAAGCGTCATCGATTAACAAGACCTGAAGATTCTGACGACTCCCTTCTTGTGGATGAGTTGGACCAAGGTCCTGCTATTCCATGGGGACGAGGTGGCAGCAGATCTGGCCCACCTTTTCTTTTTGGGGGCTTAGACACACATGGAACAACCAATTGGGGATTAAACATTGCCGCATCAGGTTGGGGTCATCAGGGTGATGCTTTTGCTACTTTAACTTCTGGGATTCAAACTGCTGGTCCAAGCTCTAAGGGAGGGGCAGATATCCAACCCTTGCAGGTTGATGATAGTGTTAGTTTTGATGATATAGGTGGGCTCTCTGAATACATTGATGCTCTAAAGGAAATGGTTTTCTTTCCATTATTATATCCAGATTTTTTTGCAAGTTACCACATAACTCCACCTAGAGGGGTCTTGTTATGTGGGCCCCCTGGCACAGGGAAAACATTGATTGCAAGAGCTTTGGCTTGTGCTGCTTCAAAAGCTGGCCAGAAGGTTAGCTTTTACATGCGCAAAGGAGCAGATGTGCTAAGCAAGTGGGTCGGTGAAGCTGAGAGACAACTTAAACTACTTTTTGAGGAAGCACAAAGGAATCAACCCTCAATTATCTTCTTTGATGAAATTGATGGACTTGCACCTGTGAGATCTAGTAAGCAAGAACAAATTCATAATTCCATTGTGTCCACTTTGCTTGCTTTGATGGATGGCCTTGATTCTCGTGGACAAGTTGTTTTAATTGGAGCTACCAACAGGATTGATGCTATTGATGGAGCCTTGCGACGTCCTGGTAGATTTGATCGTGAATTCAACTTTCCATTGCCTGGTTGTGAGGCACGTGCCGAAATATTAGATATTCATACTCGTAAGTGGAAGCATCCTCCTCCAGAGGAACTGAAAAAGGAACTTGCAGCTAGCTGTGTAGGTTACTGTGGTGCTGACCTAAAGGCTCTCTGTACCGAAGCTGCTATTCGTGCTTTCCGTGAAAAATATCCACAGGTTTATACAAGTGATGACAAATTTCTCATTGATGTTGATTCTATCAAGGTAGATAAGTGTCATTTTATTGAAGCAATGTCTACAATTACTCCTGCTGCTCATAGAGGAGCTGTTGTGCACTCCAGGCCATTGTCTCTAGTAGTTCAACCATGTCTTCAGAGACATCTAGAGAAAGTCATGAGTACTTTATCTGATATTTTCCCTCCAGTATCTGTTGCATCAGAATTGACCAAACTTTCAATGCTTTCGTTCGGCTCTGCAATTCCACTTGTATATCGACCTAGGCTTCTACTTTGTGGTGGTGAAGGCACAGGGCTGGATCATCTTGGGCCTGCGGTTTTACATGAACTGGAAAAATTTCCTGTACATTCGTTAGGACTTCCATCTCTTCTGTCAGATCCTAGTGCAAAGACATCGGAGGAAGCGTTGGTACATATATTTGGTGAAGCTAGAAGAACAACACCATCGATTCTCTATTTACCACAGTTTGATGTTTGGTGGGAAACTGCTCATGAACAGCTCAGAGCTGTTCTCCTGACTATGCTAGAAGAATTGCCATCTGACTTACCTATCTTACTTCTTGGTACATCCTCAGTTTCAGTTGCTGAAGTTGAGGAAGTGCCTACTTCAGTTTTCCCTCACCGCACAATTTATCAAGTGAACATGCCATCTACCGAAGATAGGACCTTGTTTTTCGATCACTTAATAGAAGCTGCTATGTCGATCTTGTTGGAGAAAATCAGCAAGAAATCCCAGGATGCAGGACGCCTATCTGAACTTCCCAGGGCACCAAAATTAGCGAGTGGTCCAAAGGCATCTGAGCTAAAAGCAAAGGTCGAAGCTGAGCAGCATGCACTTCGTAGATTGCGGATGTGTCTTAGAGATGTTTGCAACCGGATATTATATGACAAACGATTTAATGCCTTCCATCATCCAGTCTCAGATGAAGATGCGCCTAATTATCGCTCAATTATTCAGAATCCAATGGACATTGCTACCATCTTGCAGCATGTTGATAATGGCAACTATATCACAAGCGCCGCATTCGTGCAGGACATTGATCTTATTGTTTCCAATGCAAAGGCTTACAATGGAGAAGACTACAATGGCACTAGGATTGTCAGTAGAGCTTGTGAGCTCCGTGACGCGGTGCACGGGATGCTCTCACAAATGGATCCAGCACTGGTTGCATACTGTGACAAGATTGCTAGCCAAGGTGGTCCAGTTCAATTGCCTGATGAATTGGGGGATTCTACATTCCCTGCTAATCCTGTTGTACAGCTGGGTACTGCTACTAGAACGAGTGCTCGACTTCGTCATGTCCAACCAGAGGTTAATATGGATCAGGGTTACGAAGTATTGAAGCGCACTAAGAAGATCGGTGAAGGTGTACATGCAGAAGACAAATTGCAAGATTCAATACCGACAATGTCTTCCCAGGAGCAGCATCAAGCAAAAGACATGGATTCTGATAGGATGGAACCTGTAGCAATTGATGGAGATTTGGATGGATCTTTTACAAATAACCTTGCTGATGGTAGCAGCCTTCATGATATCACAGTGCTAGATGGTGAATTTTCGAGACAAGTGGAGTCTGTCAAGCAGCATTTCGTTAAGCGCAGTGAAAAGTACAGCATCCCACAACTGGAAGGGCTTTACACAAGAATTATGAAGGGCGTGTTTGAAACCAGAAACAAAGGAATGAATGATGATGACCTTAAGACTTCGGTTTTGGGATTTTTGTTAAAATTTGTTGAGGATGATGCGAATTTCTGA 3570 0.4286 MYPKRSSQDGPDSRPVRTSDRIKTRPAVYSRAPFLYYNSNLRRPRKNKNKTRTAASQIAKMLRPGNRKAHDSNTNSGSANLRRSTRARRANVNLIEFIESSGDEDADLMRPTYRPLRNRISNSVSRDDVISSKRKRGGETKPTPRREGLRPQSDDDQDLSEEKVEQDETENGNDVEENDAEDGHNEMEGDAEGEDEGEDDGDEDGDDEEGEEEQDGRRRYDLRNRADVRRFSMEEGKARPRSPRRVLHQGMGTKVSRDVRKGGSRVHKRHRLTRPEDSDDSLLVDELDQGPAIPWGRGGSRSGPPFLFGGLDTHGTTNWGLNIAASGWGHQGDAFATLTSGIQTAGPSSKGGADIQPLQVDDSVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKHPPPEELKKELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSIKVDKCHFIEAMSTITPAAHRGAVVHSRPLSLVVQPCLQRHLEKVMSTLSDIFPPVSVASELTKLSMLSFGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTSEEALVHIFGEARRTTPSILYLPQFDVWWETAHEQLRAVLLTMLEELPSDLPILLLGTSSVSVAEVEEVPTSVFPHRTIYQVNMPSTEDRTLFFDHLIEAAMSILLEKISKKSQDAGRLSELPRAPKLASGPKASELKAKVEAEQHALRRLRMCLRDVCNRILYDKRFNAFHHPVSDEDAPNYRSIIQNPMDIATILQHVDNGNYITSAAFVQDIDLIVSNAKAYNGEDYNGTRIVSRACELRDAVHGMLSQMDPALVAYCDKIASQGGPVQLPDELGDSTFPANPVVQLGTATRTSARLRHVQPEVNMDQGYEVLKRTKKIGEGVHAEDKLQDSIPTMSSQEQHQAKDMDSDRMEPVAIDGDLDGSFTNNLADGSSLHDITVLDGEFSRQVESVKQHFVKRSEKYSIPQLEGLYTRIMKGVFETRNKGMNDDDLKTSVLGFLLKFVEDDANF 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03683 1189 MobiDBLite consensus disorder prediction 119 282 - -
Car06g03683 1189 CDD AAA 400 539 - -
Car06g03683 1189 Gene3D - 362 632 IPR027417 -
Car06g03683 1189 PRINTS Bromodomain signature 932 950 IPR001487 GO:0005515
Car06g03683 1189 PRINTS Bromodomain signature 950 969 IPR001487 GO:0005515
Car06g03683 1189 PRINTS Bromodomain signature 916 932 IPR001487 GO:0005515
Car06g03683 1189 MobiDBLite consensus disorder prediction 212 242 - -
Car06g03683 1189 ProSitePatterns AAA-protein family signature. 509 527 IPR003960 GO:0005524|GO:0016887
Car06g03683 1189 PANTHER AAA DOMAIN-CONTAINING 1 1184 IPR045199 -
Car06g03683 1189 CDD Bromo_AAA 884 994 - -
Car06g03683 1189 Gene3D - 540 625 - -
Car06g03683 1189 MobiDBLite consensus disorder prediction 128 157 - -
Car06g03683 1189 Pfam ATPase family associated with various cellular activities (AAA) 404 539 IPR003959 GO:0005524|GO:0016887
Car06g03683 1189 SMART AAA_5 400 541 IPR003593 -
Car06g03683 1189 MobiDBLite consensus disorder prediction 1 27 - -
Car06g03683 1189 Gene3D - 661 833 IPR027417 -
Car06g03683 1189 PANTHER BNAC08G44480D PROTEIN 1 1184 - -
Car06g03683 1189 MobiDBLite consensus disorder prediction 853 872 - -
Car06g03683 1189 ProSiteProfiles Bromodomain profile. 907 969 IPR001487 GO:0005515
Car06g03683 1189 SMART bromo_6 884 991 IPR001487 GO:0005515
Car06g03683 1189 Gene3D - 876 1004 IPR036427 GO:0005515
Car06g03683 1189 Pfam Bromodomain 896 965 IPR001487 GO:0005515
Car06g03683 1189 Pfam AAA+ lid domain 566 603 IPR041569 -
Car06g03683 1189 MobiDBLite consensus disorder prediction 39 85 - -
Car06g03683 1189 MobiDBLite consensus disorder prediction 68 85 - -
Car06g03683 1189 MobiDBLite consensus disorder prediction 158 211 - -
Car06g03683 1189 SUPERFAMILY Bromodomain 880 996 IPR036427 GO:0005515
Car06g03683 1189 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 629 IPR027417 -
Car06g03683 1189 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 688 903 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03683 Car-Chr6 68581033 68587674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03683 350 604 Calmodulin-binding Proteins AT3G56690 36.293 1.07e-40 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03683 K22531 - gmx:100787765 1983.76