Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03662 ATGGATCCAGAGAGATCAATGGAGGAGCAATTTTCCAAGCTACATCCTTCATTGCCAGAAAACACCAGAATTGGAATAGTTGGTGCTGGTCCAAGTGGCTTATCAGCTGCTTATGCATTAACCAGGCTTGGTTATAAGAATGTTACAGTATTGGAGAAACATCACACGGTCGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTATATGATTTGGGAGGACAAGTTCTTGTTGCAAGCAGTGCTCCAGTGATCTTTCACTTGGCGAAAGAGACAGGCTCTGCATTAGAAGAATTGGACTCTCACAAGCTTGCTGTTGTTGACCCTTCCTCTGGAGAATATCACGATATTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTTACATTGGAAATACAAGAAAAAGTGAAGAATTGCGGTCGTATTGGAGTCCATGCTGTTAGTGACATTGCTTCAGACTTAACTCCAGAGTATCTAAAATGTCATGGACTCAAATCCATTCCTAAATCTGTAGCTTATGGTTACACTGCTTCAGGATATGGGTTTATTCAAGACATGCCTTATGCTTACCTTCATGAATTTACTAGAACTTCGATGGCTGGAAAAATTCGACGATTCAAAGGTGGATATACAAGTCTTTGGCAGAGTATTGCTGAATCACTTCCTTTGAGACTTCTTTGTAACACTGAAGTATTGGCAATCAAGAGGAACTCTGACGGTGTCACAGTTCGTATCAAGAGCTTGGATGTAGTTGAAACATTGGAATTTGATAAGATCATAATTTCTGGTTCATTTCCATTAAAATATGGGAAAATTTACAGATCACCTTCTAATTGCATAGAATGCAAGAAAGAAATAATGGATGCAAGTGACCTTGAAAAGGATTTATTCAGCAAAGTCGAGACAAATGACTACTACACCACTGTTTTCAAGATTAAAGGGCTAGAACATTTGCCTATTGGATTTTATTATTTTAGTAAATATATGGAAGATCCCAGCACGATTGGAAATCCAGTGGCAATGCAGAAATTTTATGCTGACTCTAATATATTCTTGTTCTGGTCCTATGGCAACTCTGTTGATATTAAGGGACCAACTGTCAAGGAGCTTGCCATGACAACAATACAAACCATGGGAGGAGAAGTTGAGAATTTCATTCTTCAACGCTGCTTTAAGTATTTTCCTCATGTTGGCAGCCAAGATATGAAAGATGGATTCTATGAAAAGTTAGAATCACAGCTTCAAGGTTCAAGGAATACTTACTATGTAGGTGGGCTTATGGCATTTGAGCTTACGGAGAGGAACTCATCTTATTCCATGGCTCTAATTTGCAAGAACTTTGCCAATACCAATGATTTGCCAACATTTCCTTACACTAAGAATTTGTTTCCCTTGCAAAGTGAGCACCAAAAGAAGAACCCTAAAGAACTAGATGAATTGCCAGAAGTGCAATCTCCTAATTTTCCTACTTTGAATAGCTACTTAAAGTACTGGGGGACTCATCCAATCACTCAAAATAGGACTCTTTACACATGGATTAATGAAGAAGGGACTCCGGTGTGCCAGAGGACCTATGGAGAACAACATTATTATTCTTCTTGCATTGCTCAAAAGCTCTTGACAAGCCAAAAGCCGGTTATCAAGCCTGGTGACAGGGTTCTTTTGGTCTATGTCCCTGGGTTAGATTTTATCGATGCCTTCTTTGGATGCATAAGAGCTAAAGTCTTACCAGTCCCAATTACTCCCCCAGATCCCATGCAAAGAAGTGGACAAGCATTAATGAAAATTGAAAACATTGCCAAGTCATGTGGCATTGTGGGGATTTTGTCAACAACAACTTATCACTCGGCAGTCCGTGCAGGTTCATTGAAAAGTTTAATTTCACTAACAAGAAAAAAGGAGAAATCATCAGCTCAGTGGCCGAATCTTCCGTGGTTGCACACTGATACCTGGGTCAAGAATTCCAAGAGCATTGTTTCAGAGAATGTTGATGATCAATGTGAACCACAACCTGGTGATGTATGTTTCTTGCAATTTACGTCAGGATCAACTGGTGATGCTAAAGGAGTCATGATCTCTCATGGTGGACTAATTCACAATGTGAAATTGATGCGAAGTAGATACAAAAGTACCTCAAGGACTAAACTAGTAAGTTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGCATTTTTACATCTCTTATTAGTGGTGGATCTGCATTTTTATTTTCACCAATGACATTTATCAAGAAACCACTCTTATGGCTTGAAATCATCAGCAAGTATCAAGCAACTCATAGTGCTGGCCCAAACTTTGCTTTCGAGTTACTGATTCGAAGATTGGAGTCTGACAAGGATAAGGTTAAGAATTTAGACCTTTCATCCTTGGTTTTTCTTATGCTAACAGCTCCTTTTGGCTTATCTCAAAAGGTGATGGCTCCTGGATACGGCCTGGCAGAAAATTGTGTTTTTGTCAGCTGTGCATTTGGAGAAGGTAAGCCTATCACTGTTGATTGGCAGGGAAGAGTTTGTTGTGGATATATTAATCCAGTGGATACCGATATCGACGTTCGTATAGTTGATCCAGACACTTGTGAAGAGCTTCGCGAAGACGGAAAGGAGGGAGAAATCTGGATTAGTAGTCCAAGTGCAGGGATAGGATACTGGGGAAGGGAAGAACTGAGTCAGAAAACTTTCAGTAATGAGCTTACGAATCATCTTGGACGTAACTACACAAGAACCGGAGACTTGGGACGAATAATAGATCAGAAGCTATTTATCACTGGAAGAATCAAGGATCTTATCATTGTTGCAGGAAGAAACATTTACTCGGCAGATGTGGAAAAGACAATTGAGACTTCATCTGAATTTCTTCGTCCTGGTTGTTGCGCTGTCATTGGTGTCGCTGAGGAGATTCTATTAGCAAAGGGGATTTCCATTCCAGATGGCTCTGATCAGGTTGCCTTGGTTGTGATTGCAGAAGTAAGGGATGGTAAACCAGTCAGCAAAGATGTGATTGAGAACATTAAGACACGCGTGGCAGAAGAACATGGAGTCGGTCTTGCTTCTGTCAATTTGATCAAGCCTAGAACCATCAGCAAAACAACATCAGGAAAGATCAAGAGATTTGAATGTATCAAACAGTTCACGGATGAGACGCTAAACTTAGTACCTCTAGGGACAAAATCTATGTTGACAAAGAAATCTTTGGTAAGGTCATTTACTACAGCAACATGCAAAGAAGCAAAACCATTCTGGCTCCAGAAAGTAAGAATGAGAACTATACATGTACCATGTAAAAGGATCAGTAAAAATGACATTGTAGAATTCTTGAAAGGGATTATTTCTGAGCAGACTGGAGTCGCAATCAACAGCATTTCAGTCACAGGCAACCTGACATCCTATGGAATAGACTCAATCGGTGTTGTTAAAGCAACTCAAAAACTCTCAGATTTCCTTGGAACACCAGTTGCAGCTATTGATGTTTTCACTGCATCCTGCATTACAGAATTGGCTAACTTCTCTGAAGATCTTCTATCAAAGACTCAGCCTCAGCTTTCAAGCAATGAATCCAATGTTCCAGAAGCTGATATTGATTGTACTGAATTGGTTGTGGAGGTATCCAAGTCTCGCCAATGGATTCTCATTGATACAGTTGACATCACAGACCCTGCTCTGGTGTCAATTGGAGACGAAGCTGTCATTGCGGAAGGTGTTTTGGTTCAAAGCCATGAGGTAAAGAATGGAATTCTAAGTCTCCGTCCCATTAGGATCGGAAAATGTTCTTCTATTGGACCTTATGCTGTTGTTCAAAAAGGAAGCGTTATTGGAGAGAGTGCTGAAGTACAAGCCTTGCAAAAGGTTGGCGGAGGCGAGCATGTTCTAAAGCCGAATAAACTTAATAATATTGATAAGAATAAAGATCTTCCGGTTATTAGCAGCAAAACTCAACATGATACCATCTACCACTTTATAGGGATCTATCTTGTTGGCTTTCTCAGCTCCCTCGCCGCAGCCATTGCATACTTCTTATATATCAAAATCTCCAAGCAACCTCCATCACTCCAACACTTTTCATTTGTTTGCATATGTGGGGCCTTTCACTGGATCCCGTTTATCATCATTGCATATGCTACCATGTTTTCTGATGTCTCATCCAACCCCATCACCTTTGCCATTTCATTTACCAGCGCCTACTTGCTTCACAGTCTCATACTCATCACTCTCACCGCAGTTTTTACTCGCCTCCTCAATCAAAACCAAACCAAATTCAAAACATGGCTTCGATATCAAATGAATATTTCCTGCCACCTTAGATGTGCAAAGTTTCTCTCAGGAACTGAAGCCTTCTGTGTATATTTACGCCTTTTGGGAGCAAAAATCGGAAAACATTGCTCCATTAGAGCCATCAACCCGGTTTCAAACCCAGAGTTAATGTCGATTGGCGCCGGCGTCCATATCGGAGATTTTAGCAAAATAATTACAGGGTTTCATTCTTCCAATGGTTATGTCTGGGGAAAAATTGAGGTTCATGATAATTCAGTTATCGGAAGTCAAAGCCTAATCCTCCCTAATTCTCTTATCCAAAAGAATGTGATTCTTGGTGCACTTTCATTAGCACCAATGAATTCTATACTCCAAGAGGGTGGTTTATATATTGGATCACAAACACAATCCCATGTAGGTAATTTATCTGCAACATTAAACAAAGAAGATTCACAAAAATTGACATTGACTAGAACATGGTACCAAACCTTCACATCACTCTTCACTCAGCCATTTCTACAAACAGCTTCACCTCATATCTTATTGGGTCTATCAATTTATGCTCCTTTGAACTTAATTTTTCACCTTTCCAAGAAAGTTCCAATCTTTTGGCTACTTCCTTTGTTTTGGATTCTCTCAGGCACTATGGCAGCATTAACATGTGTTATAGCCAAATGGGTTCTTGTTGGAAAAAAGAAACCAGGCGAAAAACTTCCAATATGGAGTAAAAGAATCATCATGGATAGTACATGGCAAGCTATTAGAACTTTAATTGGAGATTATTTTATGGAAATGACAAGTGGGTCATTTATGTTtgtgatgtggatgaagatgatgggtggtgatgtggatgaagatgtttatgttgatAGTATGGGGGCATTATTGAACCCTGAGATGGTGAAGATTGAGAGAGGAGGTTGTGTTGAGAAAGATGCATTGTTATTTGGACATATATATGAAGGTGATGAAGGAGGGATGGTGAAGTTTGGAGAGATTAAGATTGGTGAAGATGGGTTTGTTGGGAGTAGAGCTATGGTTATGCCTGGTGTGGTATTGGAGAATGACGCTAATCTTGCTGCTTTCTCACTTGCAATGAAACAAGAAATTATTAGGTCTACATAA 5403 0.3952 MDPERSMEEQFSKLHPSLPENTRIGIVGAGPSGLSAAYALTRLGYKNVTVLEKHHTVGGMCESVEIEGKVYDLGGQVLVASSAPVIFHLAKETGSALEELDSHKLAVVDPSSGEYHDIKVADDYVSVMSLTLEIQEKVKNCGRIGVHAVSDIASDLTPEYLKCHGLKSIPKSVAYGYTASGYGFIQDMPYAYLHEFTRTSMAGKIRRFKGGYTSLWQSIAESLPLRLLCNTEVLAIKRNSDGVTVRIKSLDVVETLEFDKIIISGSFPLKYGKIYRSPSNCIECKKEIMDASDLEKDLFSKVETNDYYTTVFKIKGLEHLPIGFYYFSKYMEDPSTIGNPVAMQKFYADSNIFLFWSYGNSVDIKGPTVKELAMTTIQTMGGEVENFILQRCFKYFPHVGSQDMKDGFYEKLESQLQGSRNTYYVGGLMAFELTERNSSYSMALICKNFANTNDLPTFPYTKNLFPLQSEHQKKNPKELDELPEVQSPNFPTLNSYLKYWGTHPITQNRTLYTWINEEGTPVCQRTYGEQHYYSSCIAQKLLTSQKPVIKPGDRVLLVYVPGLDFIDAFFGCIRAKVLPVPITPPDPMQRSGQALMKIENIAKSCGIVGILSTTTYHSAVRAGSLKSLISLTRKKEKSSAQWPNLPWLHTDTWVKNSKSIVSENVDDQCEPQPGDVCFLQFTSGSTGDAKGVMISHGGLIHNVKLMRSRYKSTSRTKLVSWLPQYHDMGLIGGIFTSLISGGSAFLFSPMTFIKKPLLWLEIISKYQATHSAGPNFAFELLIRRLESDKDKVKNLDLSSLVFLMLTAPFGLSQKVMAPGYGLAENCVFVSCAFGEGKPITVDWQGRVCCGYINPVDTDIDVRIVDPDTCEELREDGKEGEIWISSPSAGIGYWGREELSQKTFSNELTNHLGRNYTRTGDLGRIIDQKLFITGRIKDLIIVAGRNIYSADVEKTIETSSEFLRPGCCAVIGVAEEILLAKGISIPDGSDQVALVVIAEVRDGKPVSKDVIENIKTRVAEEHGVGLASVNLIKPRTISKTTSGKIKRFECIKQFTDETLNLVPLGTKSMLTKKSLVRSFTTATCKEAKPFWLQKVRMRTIHVPCKRISKNDIVEFLKGIISEQTGVAINSISVTGNLTSYGIDSIGVVKATQKLSDFLGTPVAAIDVFTASCITELANFSEDLLSKTQPQLSSNESNVPEADIDCTELVVEVSKSRQWILIDTVDITDPALVSIGDEAVIAEGVLVQSHEVKNGILSLRPIRIGKCSSIGPYAVVQKGSVIGESAEVQALQKVGGGEHVLKPNKLNNIDKNKDLPVISSKTQHDTIYHFIGIYLVGFLSSLAAAIAYFLYIKISKQPPSLQHFSFVCICGAFHWIPFIIIAYATMFSDVSSNPITFAISFTSAYLLHSLILITLTAVFTRLLNQNQTKFKTWLRYQMNISCHLRCAKFLSGTEAFCVYLRLLGAKIGKHCSIRAINPVSNPELMSIGAGVHIGDFSKIITGFHSSNGYVWGKIEVHDNSVIGSQSLILPNSLIQKNVILGALSLAPMNSILQEGGLYIGSQTQSHVGNLSATLNKEDSQKLTLTRTWYQTFTSLFTQPFLQTASPHILLGLSIYAPLNLIFHLSKKVPIFWLLPLFWILSGTMAALTCVIAKWVLVGKKKPGEKLPIWSKRIIMDSTWQAIRTLIGDYFMEMTSGSFMFVMWMKMMGGDVDEDVYVDSMGALLNPEMVKIERGGCVEKDALLFGHIYEGDEGGMVKFGEIKIGEDGFVGSRAMVMPGVVLENDANLAAFSLAMKQEIIRST 1800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03662 1800 Gene3D - 936 1062 IPR045851 -
Car06g03662 1800 Gene3D - 94 202 - -
Car06g03662 1800 Pfam Phosphopantetheine attachment site 1114 1178 IPR009081 -
Car06g03662 1800 Pfam AMP-binding enzyme 523 941 IPR000873 -
Car06g03662 1800 Gene3D Hexapeptide repeat proteins 1214 1294 - -
Car06g03662 1800 Gene3D - 302 395 - -
Car06g03662 1800 SUPERFAMILY Trimeric LpxA-like enzymes 1658 1793 IPR011004 -
Car06g03662 1800 Pfam Flavin containing amine oxidoreductase 192 267 IPR002937 GO:0016491
Car06g03662 1800 PANTHER AMINE OXIDASE 1218 1567 - -
Car06g03662 1800 PANTHER AMINE OXIDASE 1 1218 - -
Car06g03662 1800 PANTHER AMINE OXIDASE 1568 1799 - -
Car06g03662 1800 PANTHER AMP-BINDING ENZYME 1 1218 - -
Car06g03662 1800 PANTHER AMP-BINDING ENZYME 1218 1567 - -
Car06g03662 1800 PANTHER AMP-BINDING ENZYME 1568 1799 - -
Car06g03662 1800 SUPERFAMILY ACP-like 1107 1186 IPR036736 -
Car06g03662 1800 SUPERFAMILY FAD/NAD(P)-binding domain 20 271 IPR036188 -
Car06g03662 1800 Gene3D Hexapeptide repeat proteins 1450 1589 - -
Car06g03662 1800 ProSiteProfiles Carrier protein (CP) domain profile. 1109 1183 IPR009081 -
Car06g03662 1800 Pfam NAD(P)-binding Rossmann-like domain 26 92 - -
Car06g03662 1800 ProSitePatterns Phosphopantetheine attachment site. 1138 1153 IPR006162 -
Car06g03662 1800 Gene3D - 479 935 IPR042099 -
Car06g03662 1800 PRINTS Adrenodoxin reductase family signature 47 60 - -
Car06g03662 1800 PRINTS Adrenodoxin reductase family signature 23 45 - -
Car06g03662 1800 CDD FAAL 508 1055 IPR040097 GO:0008610
Car06g03662 1800 Gene3D - 1098 1181 IPR036736 -
Car06g03662 1800 SUPERFAMILY Trimeric LpxA-like enzymes 1221 1295 IPR011004 -
Car06g03662 1800 SUPERFAMILY Trimeric LpxA-like enzymes 1458 1559 IPR011004 -
Car06g03662 1800 Gene3D - 23 445 IPR036188 -
Car06g03662 1800 ProSitePatterns Putative AMP-binding domain signature. 679 690 IPR020845 -
Car06g03662 1800 SUPERFAMILY Acetyl-CoA synthetase-like 492 1060 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03662 Car-Chr6 68012407 68021543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03662 648 1056 Monolignol Biosynthesis Gene Families AT1G20480 25.058 1.68e-17 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03662 - - pvu:PHAVU_011G056700g 2548.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03662 06 68012407 68021543 Car06g03662 06 68012407 68021543 ECH
Car01g02640 01 52005462 52014333 Car06g03662 06 68012407 68021543 PCT