Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03656 ATGGAGTCAGATCTTCAGCAACATCCAACTATGTTACTAGATCACCAAAATCATCATCAGCAACAGATTAATTCAGGCTTAACACGGTTTAAATCTGCTCCAAGTTCATATTTTTCGAATATCATTGATAAAGAATTCTATGAGCATCTTTTCAATCGACCTTCAAGCCCTGAAACAGAACGAGTTTTTGCACGGTTTATGAATAGTCTCAGTGGTAGTGGTGATAGtgcttctgctactgcttctgcttctgttgctgctGTTGATGATTCACTGACTCAGAATCTTTCAACTGTTCAACAACATCCTGTAGTAAAAGAAGAGATTGATCAACAATCTCAAACTATGTCAACAATGAATAATAATGAAACTGTGGCTATTcaccaacttcaacaacaacaacaacaacaaagtaatattaataataattataGTTCTTGTGCTCCTCCTCATAATTTTTATCAAAGTTCTGGAAGACCACCTTTGCCAAATCAAATGAAGACTGGTCGAGGAATTAGTTCTAATCTTATTAGACATGGTAGCTCACCTGCTGGATTGTTTTCAAACATTAACATTGAAACTGGGTTTGCTGCTATGAGAGGAATGGGAACAATGGGAGCTGCTAATAGCACTAGCAAGGAAGCAAATATTTCTCCAACAGTAGTGAGGTTAAAGAATACTCCAAACTACTCGGTGTTAATGTCTTCAGGAGCTGAAATCGGTAATAGTAGCAATCCAACAAATAATCCTGAATCTGAAGGTTTTGCTGAAACCCGGGGTAATGATTTTATCCCGGGTTTCCCCTTAAGTACATGGGAGGATACTGCAATGATATCTGATAATATCACCGGTGTTAAAAGATACCGAGACGATGATGTTAAACCATTTTCTGCAGCTGAAATTAAGAATGAAACAGGAGGCCAGCAGCCTAATGCTCCTTTGGCTCATCAGATGAGTTTGCCGAATACTACGGCGGAATTGGCAGCCATTGAGAAATTTTTGCAGTTCTCTGATTCTGTTCCGTGTAAAATTCGTGCCAAGCGCGGTTGTGCCACTCACCCAAGAAGCATTGCAGAAAGGGTGAGAAGAACTAAAATTAGTGAGCGTATGAGGAAACTACAAGATCTGGTGCCAAACATGGATAAGGTAAGACCTACAAAAACAAGTTCAGACTCTTTCAGATAA 1185 0.3654 MESDLQQHPTMLLDHQNHHQQQINSGLTRFKSAPSSYFSNIIDKEFYEHLFNRPSSPETERVFARFMNSLSGSGDSASATASASVAAVDDSLTQNLSTVQQHPVVKEEIDQQSQTMSTMNNNETVAIHQLQQQQQQQSNINNNYSSCAPPHNFYQSSGRPPLPNQMKTGRGISSNLIRHGSSPAGLFSNINIETGFAAMRGMGTMGAANSTSKEANISPTVVRLKNTPNYSVLMSSGAEIGNSSNPTNNPESEGFAETRGNDFIPGFPLSTWEDTAMISDNITGVKRYRDDDVKPFSAAEIKNETGGQQPNAPLAHQMSLPNTTAELAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKVRPTKTSSDSFR 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03656 394 MobiDBLite consensus disorder prediction 238 259 - -
Car06g03656 394 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 16 383 - -
Car06g03656 394 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 350 394 IPR011598 GO:0046983
Car06g03656 394 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 383 - -
Car06g03656 394 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 353 388 IPR036638 GO:0046983
Car06g03656 394 MobiDBLite consensus disorder prediction 238 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03656 Car-Chr6 67956633 67959679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03656 1 381 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 40.102 7.92e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03656 - - gmx:100803833 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03656 06 67956633 67959679 Car06g03656 06 67956633 67959679 ECH
Car06g03656 06 67956633 67959679 Car01g02630 01 51918486 51922151 ECH