Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03652 ATGGAATCAGCTCCACCGTCGTTGGAGCTGGACCTTGACAATCTTAAAGCACTCAAAATCCTAGGCAAAGGTGCCATGGGCACTGTCTTCCTCGTccacaaccccaccgccgccaccaaaaccaccaccacATTCGCTCTCAAAGTCGTTGACAAATCTTCAATCCACGCCAAGCACGACGCCGAACGCCGCGCCCATTGGGAAATCCAAGTCCTCTCCATGCTTTCCCACCCTTTTCTCCCTTCCATTCTCGGCACCTACGAATCCCCACAGTTTCTCGCGTGGGCCCTACCTTATTGTCCCGGTGGTGACCTCAATGTCCTTCGTTACCGCCAAAACGACCGCGTTTTCTCCCCTTCTGTTATCCGCTTTTATTTAGCAGAAATCCTCTGCGCTCTCGACCACCTTCATTCCATGGGCATCGCTTACCGTGACTTAAAACCCGAAAATGTCCTCATTCAAAGTTCTGGCCACGTCACCCTCACCGATTTCGACCTCTCTCGTAAACTCAACCCCAAAACCGTTAAAACCCTCATttctaattctacttctaataattctaattTGCCTTTACCTAATTCGAAGCTTCCAGAATCTCACCGTAAACACCGACGGAATTTCAGCCGTTGGATCCCTCACATTCCAGAATCTTCTCATCACATGAAGAATGGTTTCAACTTGAAAAAAACCAAGTCAGCACGAGTTAGCCCCGTGAGTCGAAGGAAACTCAGTTTCTCCAACGGCGAACGATCCAACTCGTTTGTTGGAACGGAAGAGTATGTCTCGCCGGAGGTTGTTCGTGGTGACGGTCACGAGTTCGCTGTTGACTGGTGGGCTCTAGGGATTCTTACGTATGAAATGTTATACGGTACGACGCCTTTTAAGGGGAAGAATCGGAAGGAAACGTTTAGAAATGTTCTGACGAAGTCGCCGGAGTTTGTTGGGAAAAGTTCAAAGTTGACGGATTTGATAGAGAAGTTGTTGGAAAAGGATCCAATGAAGCGACTGGGTTACACGCGTGGCGCTGCGGAGATTAAAGAACACGAGTTTTTCAGAGGAGTACATTGGGAATTGTTGACGGAGGTGGTCCGGCCACCGTTTATTCCGTCCAGGGATGACGGTATGGGAGAATTATCGCCGGAGAAGATTTTCAATGGTACTGGCGGTGTGGACATTAGGGATTATTTTCAACGCTTGAAACTGCCGCCGTCGTTGCCGCCGTCACCATTACCGTCATCATCTTCAAAGTTTAGGAGAAATGTTTCGCTATCGGAATTCTGA 1281 0.4645 MESAPPSLELDLDNLKALKILGKGAMGTVFLVHNPTAATKTTTTFALKVVDKSSIHAKHDAERRAHWEIQVLSMLSHPFLPSILGTYESPQFLAWALPYCPGGDLNVLRYRQNDRVFSPSVIRFYLAEILCALDHLHSMGIAYRDLKPENVLIQSSGHVTLTDFDLSRKLNPKTVKTLISNSTSNNSNLPLPNSKLPESHRKHRRNFSRWIPHIPESSHHMKNGFNLKKTKSARVSPVSRRKLSFSNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFRNVLTKSPEFVGKSSKLTDLIEKLLEKDPMKRLGYTRGAAEIKEHEFFRGVHWELLTEVVRPPFIPSRDDGMGELSPEKIFNGTGGVDIRDYFQRLKLPPSLPPSPLPSSSSKFRRNVSLSEF 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03652 426 ProSiteProfiles Protein kinase domain profile. 15 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03652 426 Gene3D Transferase(Phosphotransferase) domain 1 104 176 - -
Car06g03652 426 MobiDBLite consensus disorder prediction 179 199 - -
Car06g03652 426 MobiDBLite consensus disorder prediction 179 194 - -
Car06g03652 426 Gene3D Transferase(Phosphotransferase) domain 1 248 370 - -
Car06g03652 426 Pfam Protein kinase domain 17 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03652 426 Pfam Protein kinase domain 246 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03652 426 PANTHER FLIPPASE KINASE 1-RELATED 10 401 - -
Car06g03652 426 MobiDBLite consensus disorder prediction 403 426 - -
Car06g03652 426 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 10 401 - -
Car06g03652 426 ProSitePatterns Protein kinases ATP-binding region signature. 21 48 IPR017441 GO:0005524
Car06g03652 426 MobiDBLite consensus disorder prediction 411 426 - -
Car06g03652 426 SMART serkin_6 15 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03652 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Car06g03652 426 SUPERFAMILY Protein kinase-like (PK-like) 12 399 IPR011009 -
Car06g03652 426 Gene3D Phosphorylase Kinase; domain 1 15 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03652 Car-Chr6 67896312 67897754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03652 10 426 AGC Kinase Gene Family AT3G20830 60.757 9.25e-169 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car06g03652 Pkinase 1.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03652 - K08286 gmx:100785281 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03652 06 67896312 67897754 Car06g03652 06 67896312 67897754 ECH
Car01g02627 01 51883512 51885002 Car06g03652 06 67896312 67897754 PCT