Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03651 ATGAATAATAACTGGCTTTCTTTCCCTCTCTCTCCTTCTCATTCTTCTTTACCACCTAATGATCTCCAAGCTACTCAATATCATCACTTTCCTCTTGGTTTAGTCAACCAAAACATCGAAAACCCTTTCCAAAATCATGATTGGAATCTGATGAACGCACAAAGTAGCAATGAAGTTCCAAAGGTAGCAGATTTTCTTGGTGTGTGCAAGTCTGAAAATCAAACAGATCTTGCTACACCAAATGAAATTCAATCAAACGATTCAGATAATTATTTGTTTACAAATAATAATCTCATGCTAATGCAAAACCAAGTGGTAACAACAACCACGAATGAGTATGATCAAGAAAAGGGTAATAATAATAATTTGCAATCGTTAACATTATCCATGGGAAGTGGTAAGGATTCAACATGTGAAACTAGTGGTGATAATAGTACAAATAGTGCTGTTGAAGTTGCTGTTCCAAAAAGAACTTCTGAAACCTTTGGACAAAGAACTTCAATATATCGTGGTGTAACAAAACATAGATGGACTGGAAGGTATGAAGCTCACCTTTGGGATAATAGCTGTAGAAGAGAAGGACAATCAAGAAAAGGCCGCCAAGTCTATTTAGGTGGATATGATAAAGAAGAGAAAGCTGCTAGGTCATATGATTTAGCTGCACTTAAGTATTGGGGGACATCCACCACTACTAACTTTCCAGTTAGTAACTATGAGAAGGAAATAGATGAAATGAAGCACATGACAAGACAAGAATTTGTAGCTTCAATTAGAAGGAAAAGCAGTGGTTTCTCAAGGGGTGCATCAATGTACCGTGGAGTTACAAGGCATCATCAACATGGAAGATGGCAAGCAAGGATTGGCAGAGTTGCAGGAAACAAAGACCTTTATTTGGGAACTTTCAGCACGGAAGAAGAAGCTGCAGAAGCATACGACATAGCCGCGATAAAGTTCAGAGGACTTAACGCCGTAACGAACTTCGACATGAGTCGTTACGACGTTAAAGCCATTCTAGAAAGCAACACACTCCCAATAGGAGGAGGTGCTGCAAAGAGACTTAAAGAAGCACAAGCTCTAGAATCTTCTAGAAAACGTGAAGAAATGATTGCACTAAACTCATCAACTTTCCAATACGGAACATCAAGCTCTAGTACTAGTAGATTACAACCTTACCCTCTAATGCAACATCATCATCATCAATATGAACAAGTTCAACCATTGTTAACTTTACAAAACCATGAAAATTCCATTTCTCAACTCCAGAATGGTTATTTTCAAACACAGCTTGAGTTACATCAACAGAGTGGTGGTTCTTCTTCCTACGTTCATCAAACATCTCAGaataataataatagtaataataataataataataaCAATGGTTTGTTTTATAACGGTTATTTTCAGAATCATATTCCAGGTTTATATCAGGGAATGATGAACAACATGGAATCTTCTTCTTCATCATCTGTGATTGGAAATAGTAATGTTGGTGGTGGTGGGTCAAGTGGGATTTATAATAACAGTGGAGGGTTAATTGGTAATAATGCAGCGGTTGAGGAGTTTGTGCCGGTGAAAGTTGATTATGACATGCCGGCGGATGGAGGTTATGGTGGCTGGACGGCGGCGGCGGAGAACATGCAGACGTCGAATACTGCAGATTTGTTTACAATGTGGAATGATTATGAAACAAGAGAGAATTAA 1704 0.3797 MNNNWLSFPLSPSHSSLPPNDLQATQYHHFPLGLVNQNIENPFQNHDWNLMNAQSSNEVPKVADFLGVCKSENQTDLATPNEIQSNDSDNYLFTNNNLMLMQNQVVTTTTNEYDQEKGNNNNLQSLTLSMGSGKDSTCETSGDNSTNSAVEVAVPKRTSETFGQRTSIYRGVTKHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARSYDLAALKYWGTSTTTNFPVSNYEKEIDEMKHMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALNSSTFQYGTSSSSTSRLQPYPLMQHHHHQYEQVQPLLTLQNHENSISQLQNGYFQTQLELHQQSGGSSSYVHQTSQNNNNSNNNNNNNNGLFYNGYFQNHIPGLYQGMMNNMESSSSSSVIGNSNVGGGGSSGIYNNSGGLIGNNAAVEEFVPVKVDYDMPADGGYGGWTAAAENMQTSNTADLFTMWNDYETREN 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03651 567 SUPERFAMILY DNA-binding domain 269 330 IPR016177 GO:0003677
Car06g03651 567 MobiDBLite consensus disorder prediction 1 20 - -
Car06g03651 567 ProSiteProfiles AP2/ERF domain profile. 270 328 IPR001471 GO:0003700|GO:0006355
Car06g03651 567 SUPERFAMILY DNA-binding domain 167 236 IPR016177 GO:0003677
Car06g03651 567 Pfam AP2 domain 168 226 IPR001471 GO:0003700|GO:0006355
Car06g03651 567 Pfam AP2 domain 271 320 IPR001471 GO:0003700|GO:0006355
Car06g03651 567 CDD AP2 167 236 IPR001471 GO:0003700|GO:0006355
Car06g03651 567 PRINTS Ethylene responsive element binding protein signature 169 180 IPR001471 GO:0003700|GO:0006355
Car06g03651 567 PRINTS Ethylene responsive element binding protein signature 310 330 IPR001471 GO:0003700|GO:0006355
Car06g03651 567 Gene3D AP2/ERF domain 270 330 IPR036955 GO:0003700|GO:0006355
Car06g03651 567 Gene3D AP2/ERF domain 168 236 IPR036955 GO:0003700|GO:0006355
Car06g03651 567 CDD AP2 269 330 IPR001471 GO:0003700|GO:0006355
Car06g03651 567 SMART rav1_2 270 334 IPR001471 GO:0003700|GO:0006355
Car06g03651 567 SMART rav1_2 168 240 IPR001471 GO:0003700|GO:0006355
Car06g03651 567 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 560 - -
Car06g03651 567 MobiDBLite consensus disorder prediction 435 460 - -
Car06g03651 567 ProSiteProfiles AP2/ERF domain profile. 168 234 IPR001471 GO:0003700|GO:0006355
Car06g03651 567 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 4 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03651 Car-Chr6 67870040 67874151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03651 3 561 AP2-EREBP Transcription Factor Family AT1G51190 59.631 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Car06g03651 AP2 1.7e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03651 K09285 - gmx:100788471 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03651 06 67870040 67874151 Car06g03651 06 67870040 67874151 ECH