Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03650 ATGGACCATGAAAAGACTGAATGTCAAGCTCCCCCCGAAGGTCCTATACTGTGCATCAACAATTGTGGATTTTTCGGAAGTGCAGCTACCATGAACATGTGTTCTAAGTGCCACAAAGACATGATGCTGAAACAGGAGCAGGCCAAGCTTGCTGCATCATCCCTTGGAAATATTATGAACGGGTCATCAAGCAACACTGAAAAGGAACCTGTTGTTGCAGCCAATGTGGATATACCAGCAGCCATTTTAGTGGAGCCTAAAACTATCTCCCAGCAACCTTTATTTGGCTCAGTTTCAGGGGGCAGTGGTGATGTCAAGCCAAAGGATGGTCCGAAACGTTGTAGCAACTGCAACAAGCGAGTTGGTTTGACAGGGTTCAATTGTCGATGTGGTAACCTTTTCTGTGCTGTACATCGCTATTCCGACAAGCATGATTGCCCATTTGATTACCGCACTGCTGCACGAGATGCCATAGCTAAAGCAAACCCAGTTGTCAAGGCTGAGAAGCTTGACAAGATTTAA 522 0.4598 MDHEKTECQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMMLKQEQAKLAASSLGNIMNGSSSNTEKEPVVAANVDIPAAILVEPKTISQQPLFGSVSGGSGDVKPKDGPKRCSNCNKRVGLTGFNCRCGNLFCAVHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03650 173 Coils Coil 170 173 - -
Car06g03650 173 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 173 - -
Car06g03650 173 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Car06g03650 173 SUPERFAMILY AN1-like Zinc finger 105 168 IPR035896 -
Car06g03650 173 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Car06g03650 173 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Car06g03650 173 ProSiteProfiles Zinc finger AN1-type profile. 108 154 IPR000058 GO:0008270
Car06g03650 173 Gene3D - 1 69 - -
Car06g03650 173 SMART AN1_Zf_4 114 151 IPR000058 GO:0008270
Car06g03650 173 Gene3D - 99 169 IPR035896 -
Car06g03650 173 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 1 173 - -
Car06g03650 173 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Car06g03650 173 Pfam AN1-like Zinc finger 114 150 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03650 Car-Chr6 67861386 67864201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03650 4 173 C2H2 Transcription Factor Family AT3G52800 43.275 5.33e-38 126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03650 06 67861386 67864201 Car06g03650 06 67861386 67864201 ECH
Car06g03650 06 67861386 67864201 Car01g02624 01 51839834 51842542 ECH