Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03646 ATGACTTGTTGCAAATGTTTGTTAGGATCAATGAAGTCTTGGTCTCTAGATGAAAAAATAGAGGCTAATGGAATTGGTGATCTGAAGAAACCTTTGTTACAAACTCAAGAAGATGTAACTCATGGTACACTTACACCTCAAATAAACGATATAAAGAGTTCATGCAAGATTAGAAACCTTAACAGTATCATGGTGTCTCCACTTCATTCAAATCCTGCAACCCCTAGTTCATTTAAAGAAAACAAAATAAAAGAAACAATAGAAGATACTAGAATTGAAATTAATGAGCTCAAGGGGGAAAATGTATCAGAATGCAGAATCAAAATTAAGGGAATGACATGCACAAGTTGTTCTCAGTCTGTTGAGCAAACCCTACAAATGGTTGATGGAGTGAAAAAGGCGGTAGTTGGTCTCGCCTTAGAGGAAGCAAAAGTACTCTTTGATCCTAAACTCATTCATACCAACAAAATAATTGAAGCCGTAGAAGATGCTGGTTTTGGAGCAGAACTCATTATCTCAAAGAATGATATGAACAAAGTGCATCTCAAACTTGAAGGAGTAGAATCTCAAGAAGATTTAAATGTTATAGTTTCTTCTCTTAATTTATCTGCTGGTGTGAACCATGTTGAAATGGATTTGACAGAACAAAAAGTTACTGTTAGCTATGATTCAGACATTACAGGTCCAAGATTTCTTATACAGTGTATTCAGGAAGCTAGTAGTGGCAACAGTGTGTATCAAGCAACTTTGCATACTAATTCAGGAAAAAGGGAGATGGAGAAAGTGAATGAAATTCGTATGTACAGGAACCAAGTTTTGTTAAGCTGCTTATTTTCTGTTCCTGTGTTTGTGTTTTCCATGATTCTTCCCATGCTTCCTCCATATGGCAACTGGTTAGACTATAAGATTCATAATATGTTCACTCTTGGGTTGTTTTTGAGATGGATCCTCAGCACTCCTGTGCAGTTCATTGTTGGAAAAAGGTTCTATTTAGGATCATATCATGCACTAAAGCGATGGTCTGCTAACATGGATGTGCTGGTTGCACTTGGAACTAATGCTGCTTATTTTTACTCAGTCTATGTTGTAATTAAAGCACTGACTTCATCAACATTTCAAGGACAAGATTTCTTTGAGACAAGTTCAATGCTGATATCATTTATTCTCTTAGGAAAATATTTGGAGATTATGGCTAAAGGGAAAACATCAGCTGCTTTAGAAAAGCTCATAAAACTTGTTCCTGATAAAGCTTTTTTACTAGCTATTGATACTAATGTAAATGTCGTTACCGAGACGGAAATCGACACTGAACTTATACAAAAGAATGATATAATTAAGATTGTTCCTGGTGCCAAAATTCCAGTTGATGGTGTTGTTATAAAAGGGAAGAGCTGTGCAAATGAAAGTATGATCACAGGGGAATCAAGACCTGTTAATAAAATTCCAGGAGATAAGGTTATAAGTGGTACCATCAATGAGAATGGTTGCTTGCTGGTCAAGGCAACTCATGTTGGATCTGAGACTGCACTTTCTCAAATTGTTCAACTTGTAGAAGCTGCTCAACTTGCAAGAGCACCAGTTCAGAAACTTGCAGATGATATTTCAAGGGTTTTTGTTCCAATTGTTGTTTCTATAGCAATCATAACTTGGCTGGGATGGTTTATTCCTGGAGAAGCAGGTTTATACCCTAAATATTGGATACCAAAAGCTATGGAtgcatttgaatttgctttgcagtttgctatttCTGTGCTGGTTGTTGCTTGTCCATGTGCTCTTGGTCTAGCTACACCAACAGCAATCATGGTTGCTTCAGGAGTTGGTGCTTCTCAAGGTGTGCTCATCAAGGGTGGAGATGCAATGGAAAAGGCACACAAGGTAAAAATTGTTGTCTTTGATAAGACTGGGACTTTGACAATTGGGAAACCAGAGGTAGTTAGTGCAGTGCTGTTTTCTAAATTTTCTAGGGAAGAGTTATGTGACATGACAATTGCTGTAGAGGCAAATAGTGAACATCCTATAGCAAAAGCTGTTGTGACACATGCTAAGAGGCTGAAGCAGAGTTGTGGATCCCAAAGCATTGAACAAATCCAAGATGTGAAGGATTTTGAGGTACACGTGGGAAGTGGTGTAAGTGGAAAAGTTAAGGCAAAAACAGTTTTAGTTGGAAACAAGAAACTCATGAATGCTTTTAATGTACCTATAAGTCCTATGGTGGAGAAATACATGTCTGAGAATGAAATTCTTGCAAGAACTTGTGTATTGGTTTCAATTGAAGGAAATATTGCTGGAGCATTTTGTGTGACTGATCCTGTTAAGCCAGAGGCAAAGAGTGTTATATCTTTTCTCCACAACATGGGGATCTCAACCATCATAGTTACTGGTGATAATTGGGCCACTGCTAATGCTATTGCAAATGAAGTTGGTATTAGTGAGGTTTTTGCTGAGATAGATCCTATGGGAAAAGCTGATATAGTCAAAGACTTGCAAATGAAAGGAATGACAGTGGCAATGGTTGGTGATGGAATAAACGATTCGCCAGCCTTAGCAGCAGCTGATGTTGGAATGGCAATTGGTGCTGGAACAGACATAGCAATAGAAGCAGCTGATGTAGTTCTTGTCAAAAGCAACTTAGAAGATGTTGTTACAGCAATAGATTTGTCTAAAAACACCATTTCTCGTATATGGATAAACTATATATGGGCTTTTGGTTACAACATTCTTGGTATGCCAATTGCAGCTGGTGTTTTGTACCCTTTTTTTGGAATCAGGTTGCCTCCATGGCTTGCTGGTGCTTGCATGGCTGCTTCATCACTTAGTGTGGTTTCTTCATCCCTCTTGTTAATGCTCTATAAAAAGCCTTTGAAAATGGATTGCACTTTATCTCATATTTAA 2895 0.3744 MTCCKCLLGSMKSWSLDEKIEANGIGDLKKPLLQTQEDVTHGTLTPQINDIKSSCKIRNLNSIMVSPLHSNPATPSSFKENKIKETIEDTRIEINELKGENVSECRIKIKGMTCTSCSQSVEQTLQMVDGVKKAVVGLALEEAKVLFDPKLIHTNKIIEAVEDAGFGAELIISKNDMNKVHLKLEGVESQEDLNVIVSSLNLSAGVNHVEMDLTEQKVTVSYDSDITGPRFLIQCIQEASSGNSVYQATLHTNSGKREMEKVNEIRMYRNQVLLSCLFSVPVFVFSMILPMLPPYGNWLDYKIHNMFTLGLFLRWILSTPVQFIVGKRFYLGSYHALKRWSANMDVLVALGTNAAYFYSVYVVIKALTSSTFQGQDFFETSSMLISFILLGKYLEIMAKGKTSAALEKLIKLVPDKAFLLAIDTNVNVVTETEIDTELIQKNDIIKIVPGAKIPVDGVVIKGKSCANESMITGESRPVNKIPGDKVISGTINENGCLLVKATHVGSETALSQIVQLVEAAQLARAPVQKLADDISRVFVPIVVSIAIITWLGWFIPGEAGLYPKYWIPKAMDAFEFALQFAISVLVVACPCALGLATPTAIMVASGVGASQGVLIKGGDAMEKAHKVKIVVFDKTGTLTIGKPEVVSAVLFSKFSREELCDMTIAVEANSEHPIAKAVVTHAKRLKQSCGSQSIEQIQDVKDFEVHVGSGVSGKVKAKTVLVGNKKLMNAFNVPISPMVEKYMSENEILARTCVLVSIEGNIAGAFCVTDPVKPEAKSVISFLHNMGISTIIVTGDNWATANAIANEVGISEVFAEIDPMGKADIVKDLQMKGMTVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAADVVLVKSNLEDVVTAIDLSKNTISRIWINYIWAFGYNILGMPIAAGVLYPFFGIRLPPWLAGACMAASSLSVVSSSLLLMLYKKPLKMDCTLSHI 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03646 964 ProSiteProfiles Heavy-metal-associated domain profile. 179 245 IPR006121 GO:0046872
Car06g03646 964 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 55 958 - -
Car06g03646 964 SUPERFAMILY Calcium ATPase, transduction domain A 431 517 IPR008250 -
Car06g03646 964 SUPERFAMILY HMA, heavy metal-associated domain 173 241 IPR036163 GO:0046872
Car06g03646 964 ProSitePatterns Heavy-metal-associated domain. 109 138 IPR017969 GO:0046872
Car06g03646 964 SFLD p-type atpase 613 890 IPR044492 -
Car06g03646 964 PRINTS Copper-transporting ATPase signature 329 348 - -
Car06g03646 964 PRINTS Copper-transporting ATPase signature 381 400 - -
Car06g03646 964 PRINTS Copper-transporting ATPase signature 816 833 - -
Car06g03646 964 PRINTS Copper-transporting ATPase signature 912 926 - -
Car06g03646 964 PRINTS Copper-transporting ATPase signature 540 554 - -
Car06g03646 964 PRINTS Copper-transporting ATPase signature 401 419 - -
Car06g03646 964 Coils Coil 80 100 - -
Car06g03646 964 SUPERFAMILY Calcium ATPase, transmembrane domain M 380 622 IPR023298 -
Car06g03646 964 ProSitePatterns E1-E2 ATPases phosphorylation site. 633 639 IPR018303 -
Car06g03646 964 CDD HMA 107 169 IPR006121 GO:0046872
Car06g03646 964 Pfam E1-E2 ATPase 430 609 - -
Car06g03646 964 CDD P-type_ATPase_Cu-like 272 935 - -
Car06g03646 964 SUPERFAMILY HAD-like 629 945 IPR036412 -
Car06g03646 964 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 384 916 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car06g03646 964 Gene3D - 622 889 IPR023214 -
Car06g03646 964 PRINTS P-type cation-transporting ATPase superfamily signature 467 481 - -
Car06g03646 964 PRINTS P-type cation-transporting ATPase superfamily signature 839 858 - -
Car06g03646 964 PRINTS P-type cation-transporting ATPase superfamily signature 764 775 - -
Car06g03646 964 PRINTS P-type cation-transporting ATPase superfamily signature 786 796 - -
Car06g03646 964 PRINTS P-type cation-transporting ATPase superfamily signature 862 874 - -
Car06g03646 964 PRINTS P-type cation-transporting ATPase superfamily signature 631 645 - -
Car06g03646 964 ProSiteProfiles Heavy-metal-associated domain profile. 104 170 IPR006121 GO:0046872
Car06g03646 964 Pfam haloacid dehalogenase-like hydrolase 627 853 - -
Car06g03646 964 Gene3D - 642 772 IPR023299 GO:0000166
Car06g03646 964 PRINTS Copper-transporting ATPase 1 signature 130 153 - -
Car06g03646 964 PRINTS Copper-transporting ATPase 1 signature 104 129 - -
Car06g03646 964 PRINTS Copper-transporting ATPase 1 signature 202 223 - -
Car06g03646 964 PRINTS Copper-transporting ATPase 1 signature 272 293 - -
Car06g03646 964 PRINTS Copper-transporting ATPase 1 signature 327 352 - -
Car06g03646 964 PRINTS Copper-transporting ATPase 1 signature 159 179 - -
Car06g03646 964 PRINTS Copper-transporting ATPase 1 signature 307 327 - -
Car06g03646 964 Gene3D - 399 521 - -
Car06g03646 964 SUPERFAMILY HMA, heavy metal-associated domain 100 170 IPR036163 GO:0046872
Car06g03646 964 SFLD Haloacid Dehalogenase 613 890 - -
Car06g03646 964 Gene3D - 101 174 - -
Car06g03646 964 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 344 948 IPR027256 GO:0006812|GO:0016021|GO:0019829
Car06g03646 964 Pfam Heavy-metal-associated domain 107 166 IPR006121 GO:0046872
Car06g03646 964 PANTHER ATP7, ISOFORM B 55 958 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03646 Car-Chr6 67803338 67813359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03646 75 958 Primary Pumps ATPases AT1G63440 56.180 0.0 990
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03646 K17686 - gmx:100793894 1412.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03646 06 67803338 67813359 Car06g03646 06 67803338 67813359 ECH