Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03645 ATGAGTTGGAACCCGCACATGGAAGTCCATTACAACAACATCAGCTATCCCTATAGTACAGCAGGAAGCTTTATTGAATATTTTGAAGGCCTCACCTACGAACATGTTAACTTCATTTTTTCCGGTGCATCACATGCTCAGGAGAGCTCGTACCCTTCAAATTCAACCTTTTACAAGTTTGGACTATCAGAACCTGACAATACCTCATACTATCGCTACAATCATGGTTATGAGGTAAATCATCACGAACCACAAGTAGATGAGTATAGGAGGCCTTCAGAAAACTCTTCAATAATCAGTGAACAGACTCTGGCTGTAAGCACAGAATGGGGAGAAGGTGGAAACACTAATGCACAAGACAATTCTATTGAATGCCCACGAAGACATCATAGTAATTCCAACGATTCTCAGGTCATTTGGCAAGACAATATTGATCCCGACAACATGACCTATGAGGAATTACTTGAATTAGGTGAGGCTGTTGGAACTCAAAGCCGTGGTCTCACTCAAGAACAGATCTCCTTGCTTCCAGTTTCTAAGTTCAAGTGTGGGTTCTTCTTGAGGAAGAAGTCACGGGATGAGAGATGCGTGATTTGTCAGATGGAATATAAAAGAGGTGACAAGAGGATCACTTTGCCATGTAAACATGTCTATCATGCTAGCTGTGGGAACAAATGGCTTAGCATTAATAAGGCTTGCCCTATATGTTACACAGAAGTGTTTGCCGACAAATCAAAACAAAAATAA 747 0.411 MSWNPHMEVHYNNISYPYSTAGSFIEYFEGLTYEHVNFIFSGASHAQESSYPSNSTFYKFGLSEPDNTSYYRYNHGYEVNHHEPQVDEYRRPSENSSIISEQTLAVSTEWGEGGNTNAQDNSIECPRRHHSNSNDSQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTQEQISLLPVSKFKCGFFLRKKSRDERCVICQMEYKRGDKRITLPCKHVYHASCGNKWLSINKACPICYTEVFADKSKQK 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03645 248 SUPERFAMILY RING/U-box 192 243 - -
Car06g03645 248 Pfam Ring finger domain 195 236 IPR001841 -
Car06g03645 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 158 242 IPR013083 -
Car06g03645 248 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 246 - -
Car06g03645 248 ProSiteProfiles Zinc finger RING-type profile. 196 236 IPR001841 -
Car06g03645 248 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 246 IPR033276 GO:0004842|GO:0016567|GO:0046621
Car06g03645 248 SMART ring_2 196 236 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03645 Car-Chr6 67786444 67791588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03645 5 245 C3H Transcription Factor Family AT3G63530 42.915 9.43e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03645 K19045 - gmx:100793907 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03645 06 67786444 67791588 Car06g03645 06 67786444 67791588 ECH