Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03637 ATGAGAAAGCCAGAAGCATCAACCGGAAAAAACAACACCAACAAGCTTAGAAAAGGTTTGTGGTCACCAGAGGAAGATGAGAAGCTGATGAACTACATGTTAAACAGTGGACAAGGTTGTTGGAGTGATGTGGCTAGAAATGCTGGGTTACAAAGGTGTGGAAAAAGTTGTAGGCTTAGATGGATCAATTACTTGAGGCCTGATCTTAAACGTGGTGCATTCTCACCACAAGAAGAAGAACTCATCATCCATTTCCATTCACTTCTTGGAAACAGATGGTCTCAAATAGCGGCGCGATTACCAGGAAGAACGGACAATGAAATTAAGAACTTCTGGAATTCAACAATAAAGAAAAGACTAAAAAACATCTCATCCAACACGTCGCCAAATGCAAGTGAATCATCGTACGACCCTAACAAAGATCCTAACAACATGGGAGGGTTCATAACTTCTTCAACACAAGATCAAAATATTGATCATTTTATGCCTATGTTCAACACTTCATCACCATCAATGCAAAACACAGTTCTCAATACCATCCTAGAGCATGGAATAAACATGTCATCTTCTATTGGAGGTGGATTCTTCAACAATGCTACAACAGGAACATATTTCTCACAGAATCATGACAACAAAAGTTTTTATTTGGAGAAAGTTTTTGGGAGTGTAAATATTAATGGTGGAGAAGTGGAAGAAATGGAGATGTATAATGTTCCTCCTTTAGAGAGTGTTAGTGTTACTTCTGAAAATAATATAAAAGTGGAGAATATAAATGCATTATGCAATGGAAAAGATACTAACAATATTAGTAGTTATCACTTTGATGACATAAACAACAACATTAATGTTAACAACTCATGCAATGGTAGTGATGAAAATAGAGCTCATCATGAGGTGGAGAATTTATTTCATGAAGATTTAAATGTTGGAGATTGGGACTTGGAGGAGTTGATGAAAGATGTTTCATCATTTCCCTTTCTTGATTTTTCAAATTGA 996 0.3624 MRKPEASTGKNNTNKLRKGLWSPEEDEKLMNYMLNSGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHFHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNISSNTSPNASESSYDPNKDPNNMGGFITSSTQDQNIDHFMPMFNTSSPSMQNTVLNTILEHGINMSSSIGGGFFNNATTGTYFSQNHDNKSFYLEKVFGSVNINGGEVEEMEMYNVPPLESVSVTSENNIKVENINALCNGKDTNNISSYHFDDINNNINVNNSCNGSDENRAHHEVENLFHEDLNVGDWDLEELMKDVSSFPFLDFSN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03637 331 PANTHER MYB DOMAIN PROTEIN 55 7 330 - -
Car06g03637 331 MobiDBLite consensus disorder prediction 1 20 - -
Car06g03637 331 CDD SANT 21 65 IPR001005 -
Car06g03637 331 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Car06g03637 331 Pfam Myb-like DNA-binding domain 71 114 IPR001005 -
Car06g03637 331 PANTHER MYB TRANSCRIPTION FACTOR 7 330 - -
Car06g03637 331 SMART sant 70 118 IPR001005 -
Car06g03637 331 SMART sant 17 67 IPR001005 -
Car06g03637 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Car06g03637 331 Gene3D - 15 71 - -
Car06g03637 331 Gene3D - 72 143 - -
Car06g03637 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Car06g03637 331 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Car06g03637 331 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Car06g03637 331 MobiDBLite consensus disorder prediction 123 145 - -
Car06g03637 331 CDD SANT 73 113 IPR001005 -
Car06g03637 331 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03637 Car-Chr6 67667867 67671300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03637 1 329 MYB Transcription Factor Family AT3G08500 43.956 1.92e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car06g03637 Myb_DNA-binding 4.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03637 K09422 - gmx:100786151 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03637 06 67667867 67671300 Car06g03637 06 67667867 67671300 ECH
Car06g03637 06 67667867 67671300 Car01g02612 01 51742639 51743923 ECH
Car01g02612 01 51742639 51743923 Car06g03637 06 67667867 67671300 PCT