Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03635 ATGGGAGTTCGTTGCTCTAAACTCTCTCTATGCTGTTGCCCTTTCCATATCAAATCAAACCATCACAACATCTCTGATAATGATGATGAGAAGAACAAGAATGAGAAGGATTCTTCGTTTGGTTTTACTGAGTATAGCTTGGATCAACTAAGAGTTGCAACAGATGGATTTTCATCAGACAACATTGTCTCTGAACATGGAGAAAAAGCTCCCAATGTTGTCTACAGAGGTTGTCTTGAAGATGATAGGTTTGTTGCTGTGAAGCGTTTCAACAAGTCTGCTTGGCCTGATTCTCGACAATTCCTTGAGGAAGCACGAGCTGTGGGGCAGTTGAGGAGTGAAAGATTAGCTAACTTGGTTGGTTGTTGTTGTGAAGGAGAAGAGAGATTGCTTATTGCTGAGTTCATGCCCAATGAAACTCTCTCCAAACATCTTTTTCACTGGGAGGCCCAACCTATGAAATGGGCAATGAGGCTGAGGGTGGCTTTGTATTTAGCACAAGCCTTGGAATACTGCAATAGCAAAGGAAGGGCATTGTATCATGATCTTAATGCTTATAGAATTTTGTTTGATCAGGAAGGAAACCCTAGACTCTCTTGTTTTGGACTCATGAAAAACAGTAGAGATGGCAGAAGCTATAGCACAAATTTATCTTTCACTCCTCCAGAGTACTTGAGGACAGGAAGAATCACACCTGAAAGTGTAATTTACAGTTTTGGCACCTTATTGCTTGATCTTTTAAGTGGAAAGCATATTCCACCTAGTCATGCACTTGACCTTATACGAGGCAAAAATTTCCAAATGCTGATGGACTCGTGTTTGGAAGGTCATTTTTCAAACGATGATGGAACTGAATTAGTGAGATTAGCTTCGCGGTGTTTACAATATGAACCTCGTGAGAGACCAAATGCAAAGTCGCTTGTGACTGCTCTGACGACTCTTCAGAAAGAAACTTCGGTAGCGTCATATGTTTTAATGGGCTTACCGGATCGGAGTCTATCTTCAAAAGAAACAGTTTTGTTAACACCTTTTGGTGAAGCTTGTTTGAGAAGAGATCTGACTGCAATACATGAAATTTTGGAAAAGGTGGGATACAAGGATGATGAACATGTTGCGAATGAGCTGTCCTTTCAAATGTGGACAAATCAAATACAAGATACCCTAAATTTCAAGAAGCACGGGGATTCTGCTTTTCACGCCCGAGACTTCTCTACCGGCATCAACTACTATACACAATTCATCGATGGTGGGACCATGGTATCGCCAACTGTGTATGCTAGGCGCTGTTTATGCTACCTGATGAATGACATGACACAAGAAGCACTTGGAGACGCCATGCAAGCTCAATCTATATCTCCGACTTGGCCCACTGCATTTTATCTTCAAGCAGTGGCACTTTCAAGCCTTGGTATGGACAATGATGCACAAGAAAGTCTCAAAGATGGCACAACACTGGAAACCAGAAACCATAGAAATTGA 1479 0.4165 MGVRCSKLSLCCCPFHIKSNHHNISDNDDEKNKNEKDSSFGFTEYSLDQLRVATDGFSSDNIVSEHGEKAPNVVYRGCLEDDRFVAVKRFNKSAWPDSRQFLEEARAVGQLRSERLANLVGCCCEGEERLLIAEFMPNETLSKHLFHWEAQPMKWAMRLRVALYLAQALEYCNSKGRALYHDLNAYRILFDQEGNPRLSCFGLMKNSRDGRSYSTNLSFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFQMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVTALTTLQKETSVASYVLMGLPDRSLSSKETVLLTPFGEACLRRDLTAIHEILEKVGYKDDEHVANELSFQMWTNQIQDTLNFKKHGDSAFHARDFSTGINYYTQFIDGGTMVSPTVYARRCLCYLMNDMTQEALGDAMQAQSISPTWPTAFYLQAVALSSLGMDNDAQESLKDGTTLETRNHRN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03635 492 Pfam Protein tyrosine and serine/threonine kinase 74 311 IPR001245 GO:0004672|GO:0006468
Car06g03635 492 SUPERFAMILY Protein kinase-like (PK-like) 36 317 IPR011009 -
Car06g03635 492 Gene3D Phosphorylase Kinase; domain 1 30 135 - -
Car06g03635 492 ProSiteProfiles Protein kinase domain profile. 60 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03635 492 Gene3D Transferase(Phosphotransferase) domain 1 137 328 - -
Car06g03635 492 Gene3D Tetratricopeptide repeat domain 385 492 IPR011990 GO:0005515
Car06g03635 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 492 IPR045845 GO:0004672|GO:0009742
Car06g03635 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 492 - -
Car06g03635 492 SUPERFAMILY TPR-like 389 490 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03635 Car-Chr6 67629641 67633504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03635 14 314 Glycoside Hydrolase AT3G07070 32.219 5.62e-40 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Car06g03635 PK_Tyr_Ser-Thr 1.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03635 - - gmx:732542 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03635 06 67629641 67633504 Car06g03635 06 67629641 67633504 ECH