Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03623 ATGAACTTATGGACAATATACCATGTTGTTAACATCAATAAATGTCTGAATTGCTTCTTCAACGCTACCCAGTTGAATTCTTATTATTTATTATTTCTTTTCAACCCCTTCATATCCACTTCGCTCCCACTTCATCAATATCAATCGTCAACTTCAACACTTCTCAATTTCCACTTGTACACCGCTTCTCACTTTAATTCTTTGTCTTCTGGGATCTACACGttcttttcttctattttactgGAAATGGAACAACAGAAAGCGCCTATCTTGGAAGCAAGATCAGTAGAGGAAATTGAGATACCAATTGTCTCAGACAGACTTCATCTTCTTCCAATGACAACAGtgtcgtcgtcgtcttgcaattctgtttgtcgtttgtcgAGTAAGGAAAAAAGTGTTGGGGGATCAAATGAATCAGCAAAGAAACTTTCAGCACTCATAGTTTTCTATGCTATTGTTATGGTTGTTGAAGCCATAGGGGGTTTGAAAGCTCACAGTTTATCTGTTATCAGCGATGCGGCACACTTGCTTTCTGATATTGCTGGATTCTCTATCTCTCTCTTTGCAGTGTGGGCTTCAGGTTGGGAAGCAACACCTCATCAATCTTTCGGATACAATCGTCTTGAGGTTTTGGGTGCTCTTTTATCTGTGCAGTTAATTTGGTTCATATCTGGTTTTTTAATATATGAAGCAGTTGGTAGACTTCTTTATCGAAATGCTATAGTGAATGGAAAGCTCATGTTTGCAATTGCAGCATTTGGCTTTGTTCTTAACTGTAtcatggttttatggcttggtcatgatcatagtcatcatcatcatggctttggaaactcagatcatgatcatggtcatggtcatagtcatcatcaatgtggtggagattcagatcatggtcatggtcatagtcatCATCAATGCAGTGGAGACTCGGAGCACGATCATCATGGGATGGAGGAACTACCTAAAGTAACTGACGAGGAGAACCTTACAATGCTTTCAAATAGTAAGAGGAGTATGAATGTTTTGAATATAAACCTTCAAGGGGCCTATTTGCATGTCATGACTGATATGATTCAATCTATTGGAGTGATGATTGCTGGAGGAGTAATATGGGCAAAACCAGAATGGTTTATGGTTGATCTTTTATGTACTCTTATATTCTCTGTTTTATCCTTAAGTACTACTCTGCCTATGCTTAAGAATATTTTTGGCATTCTGATGGAGAGGACACCAAGTGAGATTAATATCATTCAGCTGGAAAGTGGCATTAGAAGTATCAAGGGAGTGCAGGAAGTTCATGACTTGCACGTTTGGGCCATAACAGTTGGAAAATATTTTCTATCTTGCCATGTAGTGGCTGAGCCTGGCATCAGTTCCATTGATCTACTTGCCACTATTAAGCATTATTGTGAAAACACTTATCAAATACAACATGTAACCATACAAGTTGAGTAA 1461 0.3326 MNLWTIYHVVNINKCLNCFFNATQLNSYYLLFLFNPFISTSLPLHQYQSSTSTLLNFHLYTASHFNSLSSGIYTFFSSILLEMEQQKAPILEARSVEEIEIPIVSDRLHLLPMTTVSSSSCNSVCRLSSKEKSVGGSNESAKKLSALIVFYAIVMVVEAIGGLKAHSLSVISDAAHLLSDIAGFSISLFAVWASGWEATPHQSFGYNRLEVLGALLSVQLIWFISGFLIYEAVGRLLYRNAIVNGKLMFAIAAFGFVLNCIMVLWLGHDHSHHHHGFGNSDHDHGHGHSHHQCGGDSDHGHGHSHHQCSGDSEHDHHGMEELPKVTDEENLTMLSNSKRSMNVLNINLQGAYLHVMTDMIQSIGVMIAGGVIWAKPEWFMVDLLCTLIFSVLSLSTTLPMLKNIFGILMERTPSEINIIQLESGIRSIKGVQEVHDLHVWAITVGKYFLSCHVVAEPGISSIDLLATIKHYCENTYQIQHVTIQVE 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03623 486 PANTHER METAL TOLERANCE PROTEIN B 83 486 - -
Car06g03623 486 SUPERFAMILY Cation efflux protein transmembrane domain-like 142 410 IPR027469 -
Car06g03623 486 Pfam Cation efflux family 147 409 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Car06g03623 486 TIGRFAM CDF: cation diffusion facilitator family transporter 142 486 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Car06g03623 486 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 83 486 - -
Car06g03623 486 MobiDBLite consensus disorder prediction 276 318 - -
Car06g03623 486 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 415 486 IPR036837 -
Car06g03623 486 Gene3D Cation efflux protein transmembrane domain 140 408 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03623 Car-Chr6 67547036 67550518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03623 116 486 Inorganic Solute Cotransporters AT2G46800 45.745 1.59e-97 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03623 K14689 - gmx:100789520 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03623 06 67547036 67550518 Car06g03623 06 67547036 67550518 ECH