Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03621 ATGGAGTCTGATGAATGTGATCAAGATGCAAAAAAATTGAACCTTAGGTCCTATGAGTGCAATTTTTGCAAGAGAGGTTTTTCTAATGCACAAGCACTTGGAGGACACATGAATATTCATAGGAAAGACAAAGCAAAACTAAAACAACAATTTTCAAACCAAACTCAACCATCCAATTTGGAGGCAAATTTTGTTGTTGAAGAGAAATTAGTCAAATTACCAAACTTGAATTCTAATGTGTCTCAACAAGATCATCAAGATGCCCCTTGTAAAGATGATGAAATTCTTGTAATTCATATGAGACAACAACAACTTCTACTTTTTGCAGAATCACCAACTACAAGTGAAATTCAAAAGCCACTACAAGGTGATCAAATTGAAAGGGAAATTGTTACTAAAGAAGAGGGTTTGTTATTATCTTGTGATGAAGATTCGTCATCGGAGTTAGACCTTGAATTAAGACTAGGACCTGAGCCACATGATTCATCAGCACCACCAACGGGTACAAGAAAATTCTTTTGA 522 0.3525 MESDECDQDAKKLNLRSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQFSNQTQPSNLEANFVVEEKLVKLPNLNSNVSQQDHQDAPCKDDEILVIHMRQQQLLLFAESPTTSEIQKPLQGDQIEREIVTKEEGLLLSCDEDSSSELDLELRLGPEPHDSSAPPTGTRKFF 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03621 173 Pfam C2H2-type zinc finger 18 42 - -
Car06g03621 173 MobiDBLite consensus disorder prediction 152 173 - -
Car06g03621 173 ProSitePatterns Zinc finger C2H2 type domain signature. 20 40 IPR013087 -
Car06g03621 173 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 164 - -
Car06g03621 173 PANTHER OS07G0101800 PROTEIN 3 164 - -
Car06g03621 173 Gene3D Classic Zinc Finger 5 72 - -
Car06g03621 173 ProSiteProfiles Zinc finger C2H2 type domain profile. 18 45 IPR013087 -
Car06g03621 173 SUPERFAMILY beta-beta-alpha zinc fingers 16 45 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03621 Car-Chr6 67516742 67517824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03621 16 156 C2H2 Transcription Factor Family AT3G09290 37.086 2.07e-17 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car06g03621 zf-C2H2_6 1.4e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03621 - - gmx:102667172 147.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03621 06 67516742 67517824 Car06g03621 06 67516742 67517824 ECH