Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03614 ATGGGGGAAGAGGTGAGAACAGACGAAGAACGTGTAACAGAGTGGGAAAAGGGTTTACCCAGCGTTCAGGATCTCACTCCACTTTCCATGGCTCTGATTCCGCCGGAGCTCGCTTCCGCCTTCAGCATCTCCCCGGAGCCCCACCGCACTCTCTTCGACGTCAACCGCGCTTCCCGCAACACACTCTCCATTCTCCGCGCCAGCGGAGGAAACCACCACCAAACAATCTCCTCCACCAACGACGACCTCgacgaagaagaagatgaagaaattgaagaagGCTCCGGGTCGGATTCCCGAAAACATCGGAAGATCGATTCCGCCACAGAAGAAGCCGATTCATCCGTCCGAACAGAAACGACGCTAAAACGGCCTCGTTTAGTGTGGACCCCACAGCTTCACAAACGATTCGTGGACGTGGTAGCTCACCTGGGGATTAAAAACGCGGTTCCGAAAACGATTATGCAGTTAATGAACGTGGAAGGGTTAACACGCGAGAATGTTGCGAGTCACCTTCAGAAGTATCGTCTGTACTTGAAGAGGATGCAGGGTCTTTCAAACGATGCTCCTTCTTCTTCTGATCATCTTTTTGCTTCCACACCTGTTCCTCAGAGTCTGCATGATTCTGCTAATGCCAATGGGAATTCCCATTCACATCATTCTTCTGTTCCTATTCCAATGCCTTATCCACCTCCTCCTTCTATGATGTCTATGCCTCTTATTGGTATGCCACAtcatggtcatagtcatagtcatagtcatgctcacatgggcatgCCATTACCTCCTCCTTCTGCTGCTTCTTCTTATCGGTCTCATCCTTTTAATATGATGCATCATAGGGATTGGCCTCCTCATCctcactctcactctcactctcaccctcatctctcTCCTAATGATAGTAATAAATAA 915 0.4393 MGEEVRTDEERVTEWEKGLPSVQDLTPLSMALIPPELASAFSISPEPHRTLFDVNRASRNTLSILRASGGNHHQTISSTNDDLDEEEDEEIEEGSGSDSRKHRKIDSATEEADSSVRTETTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNDAPSSSDHLFASTPVPQSLHDSANANGNSHSHHSSVPIPMPYPPPPSMMSMPLIGMPHHGHSHSHSHAHMGMPLPPPSAASSYRSHPFNMMHHRDWPPHPHSHSHSHPHLSPNDSNK 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03614 304 Pfam Myb-like DNA-binding domain 128 176 IPR001005 -
Car06g03614 304 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 284 IPR044841 GO:0003700|GO:0006355
Car06g03614 304 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 125 177 IPR006447 GO:0003677
Car06g03614 304 MobiDBLite consensus disorder prediction 245 304 - -
Car06g03614 304 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 284 - -
Car06g03614 304 SUPERFAMILY Homeodomain-like 121 181 IPR009057 -
Car06g03614 304 MobiDBLite consensus disorder prediction 186 222 - -
Car06g03614 304 MobiDBLite consensus disorder prediction 66 118 - -
Car06g03614 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 180 IPR017930 -
Car06g03614 304 MobiDBLite consensus disorder prediction 186 230 - -
Car06g03614 304 MobiDBLite consensus disorder prediction 94 118 - -
Car06g03614 304 Gene3D - 120 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03614 Car-Chr6 67472695 67475581 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03614 1 252 G2-like Transcription Factor Family AT3G46640 56.228 8.82e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car06g03614 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03614 - - aprc:113858844 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03614 06 67472695 67475581 Car06g03614 06 67472695 67475581 ECH