Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03610 ATGTGTCGGTGTCGGACACCAGGACACATCTTCGATCAGAAGTGTCGATGCTTCAGAGATTGCCAAAGCTATCTTGATAAGTGTATCGTGTTAATAATACTTGCAGCCTGTGTTGTTGTTGTCTATATTCCTAGTCGAAAGAGTTCCTTTGCAGTCATGAGTTTTGCTTTTCGAGGGAGCAGGGGAGATATTGAAACCGGATTTTCAGAATATGTTCCTGAAAGAACCTCAATGCGTGTTCATCCATCTCGGCCTGTTAATAGCAATTCTCTAGCTTTTCTTATTACAGTTATTTTTATATTCATGATATTGAACTCCCCTCAGATGTTACATTATTTTTTGCTCTGGATAGTACTGGCTGTCTTCGTGATGGCTACAAGTCTGAGGATGTATGCAACTTGTCAACAGCTGCAAGCACATGCCAGGGCTCATGCTGCAGCAGCCTCTGGGCTTCTCGGCCATGCTGAATTACGCTTTCACATGCCACCATCTATTGCAATTGCAACTAGAGGAAGATTGCAGGGACTTAGACTTCAGCTCACACTTCTTGACCGAGAATTTGATGAGCTAGATTATGACACTTTGCATGCTCTGAACTCTGATACTGCTTCTAGTACTCCTTCAATGACTGAGGAAGAGATAAATGCTTTGCCTATTCACAAATATAAAGTTCCAGGTCCAGCAATAGATGGCTCCACTGGTTTGGCATCCTCGTCTTCAGAGGCAGCTGAGATTAAACAAGACCTCAAAGGAACAGAGGGAAGTGTCAGAGGTCCAGAAGATGAGCTGACATGTACTGTATGCCTGGACCATGTTAAGAGAGCGGAACTTGTGCGTAGCTTGCCATGCTTGCATCAGTTTCATGCTAACTGCATTGACCAATGGCTTCGGCAGCAAGGAACATGTCCTGTGTGCAAATTTAGGATGCAGTTGGTAAGGCAGGGAAACAGGGAGAGAGGGTCAGATGGTTCAAATATTGTGTAG 984 0.4421 MCRCRTPGHIFDQKCRCFRDCQSYLDKCIVLIILAACVVVVYIPSRKSSFAVMSFAFRGSRGDIETGFSEYVPERTSMRVHPSRPVNSNSLAFLITVIFIFMILNSPQMLHYFLLWIVLAVFVMATSLRMYATCQQLQAHARAHAAAASGLLGHAELRFHMPPSIAIATRGRLQGLRLQLTLLDREFDELDYDTLHALNSDTASSTPSMTEEEINALPIHKYKVPGPAIDGSTGLASSSSEAAEIKQDLKGTEGSVRGPEDELTCTVCLDHVKRAELVRSLPCLHQFHANCIDQWLRQQGTCPVCKFRMQLVRQGNRERGSDGSNIV 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03610 327 MobiDBLite consensus disorder prediction 230 259 - -
Car06g03610 327 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 53 326 - -
Car06g03610 327 PANTHER TARGET OF ERK KINASE MPK-1 53 326 - -
Car06g03610 327 Pfam Ring finger domain 264 306 IPR001841 -
Car06g03610 327 ProSiteProfiles Zinc finger RING-type profile. 265 306 IPR001841 -
Car06g03610 327 CDD RING-H2_PA-TM-RING 264 306 - -
Car06g03610 327 SUPERFAMILY RING/U-box 260 312 - -
Car06g03610 327 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 320 IPR013083 -
Car06g03610 327 SMART ring_2 265 305 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03610 Car-Chr6 67436615 67441251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03610 53 327 C3H Transcription Factor Family AT3G55530 65.942 1.04e-118 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03610 K16283 - gmx:100805406 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03610 06 67436615 67441251 Car06g03610 06 67436615 67441251 ECH