Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03603 ATGTTTTCTACAGATACCCTTGTGGGGAATTTTCCTGATTCAGTGTGTATGTTTGGAAACATTCCTGTGTCTGTTTTCTCAAGCCAGAATCCAGAAAATGGGTTCAAGGTGGAAGATTCAGATTCAACATCCCCTTCAAACCATTCAGAATCTTCTGAGAGTAGTAAATATTCTAATCCTATTCTTAGATACATAAGTGATATCCTCATGGATGAAGAAGATGATTTGGAACGCAAACCCTGCATGTTGCAGGATTGTTTGAGACTCCAAGCTGCTGAAAAATCATTTTTTGATGTTCTAGGTCAAAATAAACCCAACCAACAGTACCAAGATTTTACTTTAGATGATAATTTTGGTGGAGGAATAGGAATTAGTACTAGTTCTGAATGCTATAGTAATAGTAGTAACACCACTGATAATTCTATTGTTGATTATGATTCCCAAGAAAACACCTATGAGGTACTTGATGGAATGCCTCATAATCAATTTAGAGACACTGATACACAAGGTGTTTTCCATTTTCCAAATGGTGATTGGAAGATGAATGAAGAGGGTACTATGGTTTGGGGTTCTAGAGGGTCAAGGGAAAAGAGAGGTCATCTAATGAATGGTGTTGATATCTCACATGAAGAAGATCTGAGAAGTAGCAAGATTTCAGCTGTTTATTATGATGATACTGAGTTATCAGAGATGTTTGATGAGGTACTTCTTTGTAGGGATGGTAAAAGTCCATCCTTTTTGTGTGCCAATTCTGAATCATCAAATTCACAGATTTCTAGTTCAGGAGGATCTAAATCTAATGGAAAAACATCGCGTTCTAAGAAAGGTTCCAATAAGGGTACTGCAAATCTAACTACTACAGTAGATTTATGGACTTTATTAACTCAATGTGCACAAGCTGTTGGTGGCTACGATCAAAGCAATGCAAATGAAATACTTAAGCAGATTAGGCAGCATTCTTCGCCTCATGGCGATGGACTCCAGCGTTTAGCTCATTACTTCGCCAATGGCCTTGAAGCGCGATTATTTGCTGGGACACCGATGTATAAACTCCTAAGTTCAGCATCTTCTGCAGATATGTTAAAAGCCTATAAAGTATACATCACAGCATCTCCATTTCAAAGGATGTCAAATTTCTTAGCCAACAGAACTATTCTGAAGCTGGCACAAAATAAAAGTAGTCTTCACATTATTGACTTTGGTGTTTTCTATGGCTTCCAGTGGCCTTGTCTTATTCAGCGTCTTTCAGAAAGAGCCGGCGGGCCTCCAAGGCTTCGTATCACAGGAGTTGATCTTCCTCAGCCAGGATTTAGGCCTGCGGAAAGGGTTGAGGAGACGGGTCGGCGGCTTGAGAAGTACTGCAAGAGATTTGGAGTTCCATTTGAGTACAATTGCCTAGCACAGAAATGGGACACTATAAGACTCGAGGATCTCAAGATTGATAGAGAAGAAGTAACAGTTGTTAACTGTTTATACAGATTGAAGAACCTTTCAGATGAAACGGTGACGGCGAATTGTCCAAGAGATGCTGTGTTGGGGTTGATCAGGAGGATTAATCCAAACATCTTCATACATGGTGTAGTGAATGGAACTTATAATGCACCATTTTTTCTTACTAGGTTCAGAGAAGCACTGTTCCATTTCTCATCATTGTTTGATATGCTTGAGGCTACTGTGCCGCGCGAAGATCCATATAGGTTGATGTTTGAGAAAGGGTTGTTTGGAAGGGATGCAGTAAATGTGGTAGCTTGTGAGGGAGCAGAGAGAGTTGAAAGGCCAGAGACTTACAAGCAGTGGCAGGTTAGGAACAAGAGAGCAAGGTTTAAGCAAGTCCCATTGGAACCAGAATTGGTGGATAAAGTGAAAGAAATGGTGAAGAAGGAATATTCAAAAGATTTTGTAGTTGATGAGGATGGGAAGTGGGTTTTGCAGGGATGGAAAGGGCGTATTCTGCATGCTGTTTCTTGTTGGGTTCCTGCTTAA 1983 0.4019 MFSTDTLVGNFPDSVCMFGNIPVSVFSSQNPENGFKVEDSDSTSPSNHSESSESSKYSNPILRYISDILMDEEDDLERKPCMLQDCLRLQAAEKSFFDVLGQNKPNQQYQDFTLDDNFGGGIGISTSSECYSNSSNTTDNSIVDYDSQENTYEVLDGMPHNQFRDTDTQGVFHFPNGDWKMNEEGTMVWGSRGSREKRGHLMNGVDISHEEDLRSSKISAVYYDDTELSEMFDEVLLCRDGKSPSFLCANSESSNSQISSSGGSKSNGKTSRSKKGSNKGTANLTTTVDLWTLLTQCAQAVGGYDQSNANEILKQIRQHSSPHGDGLQRLAHYFANGLEARLFAGTPMYKLLSSASSADMLKAYKVYITASPFQRMSNFLANRTILKLAQNKSSLHIIDFGVFYGFQWPCLIQRLSERAGGPPRLRITGVDLPQPGFRPAERVEETGRRLEKYCKRFGVPFEYNCLAQKWDTIRLEDLKIDREEVTVVNCLYRLKNLSDETVTANCPRDAVLGLIRRINPNIFIHGVVNGTYNAPFFLTRFREALFHFSSLFDMLEATVPREDPYRLMFEKGLFGRDAVNVVACEGAERVERPETYKQWQVRNKRARFKQVPLEPELVDKVKEMVKKEYSKDFVVDEDGKWVLQGWKGRILHAVSCWVPA 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03603 660 ProSiteProfiles GRAS family profile. 281 658 IPR005202 -
Car06g03603 660 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 25 659 - -
Car06g03603 660 Pfam GRAS domain family 292 657 IPR005202 -
Car06g03603 660 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 659 IPR005202 -
Car06g03603 660 MobiDBLite consensus disorder prediction 250 280 - -
Car06g03603 660 MobiDBLite consensus disorder prediction 32 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03603 Car-Chr6 67357662 67360357 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03603 51 659 GRAS Transcription Factor Family AT2G29060 46.860 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car06g03603 GRAS 6.2e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03603 - - lja:Lj3g3v3213190.1 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03603 06 67357662 67360357 Car06g03603 06 67357662 67360357 ECH
Car01g02593 01 51615937 51618587 Car06g03603 06 67357662 67360357 PCT