Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03599 ATGTTTGATAAAGCTTTGCTTAATGTGGAACATTTGCCACATTGCAATGAACAAAATTATTGGCTGCAGAATGAACAAGCTAACACAGAGAAGCAGCAACCTTCATCAAATAGAAGAAAGGCTTGTCCCAAGAAACAAGACAGAAAACATGAAGAAACAGTGGATTTGAGGAATCTTCTGCTTCTGTGTTCACAATCTGTGTATGTCAATGACACCATAAATGCCAATGAACTACTGAAGCAGATTAATCAACACTCTTCACCCTTTGGTGATGCAACACAACGGTTGTCTCATTACTTTGCCAATGGCCTCGATGCACGCCTTATCGGTGATGGTACTGGAGCACAAACATTCTTTTCCTCTTCTAGCTTCAAAAGGATCACTGCTGCTAAGTTTTTGAAAGCTTACCAAGTTCATTATATTAGCCCTCCATTCAAAAAACTTGCATACTTCTTTGCAAATAAAATGATTATGAAAGTTGCTGCAAAGGCTGAATCCCTTCATATTATTGATTTTGGTATTCTTTATGGTTTTCAATGGCCAATGCTTATTAAGTTTTTATCAAATAGAGAATATGGACCTCCAAAGCTGAGGATCACCGGGATAGAATTCCCCTTACCCGGCTTTCGTCCCATGGAAAGAATTCAGGAGACTGGTCGTCGTCTTGCAAAATATTGCAAGCGTTTCAATGTTCCCTTTGAGTTCAATGCCATAGCATCATGGAACTGGGAAACAATTCGAGTCGAAGATCTTAAGATCAAGAGCAACGAGCGGGAAAATGAATGGAGGATGATGATTCAGAAGGAAAGTGTTGGTAGGGAGGCTATGAATGTTGTAGCATGTGAAGGTTTAGAGAGAGTTGAGAGGCCTGAGACATACAAACAGTGGCAGGTTAGGAACACAAGGGCTGGTTTCAAGCAGCTTCCATTGAACTCAGAATTAATGGCCAATTTTAGGACAGAGTTAAGGCAATGGTACCATAAAGATTTTGTATTTGATGAAGACAGCAACTGGATGCTTCAAGGTTGGAAAGGTCGTATTTTATATGCTTCCACATGTTGGGTGCCATCATAA 1074 0.4004 MFDKALLNVEHLPHCNEQNYWLQNEQANTEKQQPSSNRRKACPKKQDRKHEETVDLRNLLLLCSQSVYVNDTINANELLKQINQHSSPFGDATQRLSHYFANGLDARLIGDGTGAQTFFSSSSFKRITAAKFLKAYQVHYISPPFKKLAYFFANKMIMKVAAKAESLHIIDFGILYGFQWPMLIKFLSNREYGPPKLRITGIEFPLPGFRPMERIQETGRRLAKYCKRFNVPFEFNAIASWNWETIRVEDLKIKSNERENEWRMMIQKESVGREAMNVVACEGLERVERPETYKQWQVRNTRAGFKQLPLNSELMANFRTELRQWYHKDFVFDEDSNWMLQGWKGRILYASTCWVPS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03599 357 MobiDBLite consensus disorder prediction 26 49 - -
Car06g03599 357 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 1 257 - -
Car06g03599 357 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 257 356 - -
Car06g03599 357 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 257 IPR005202 -
Car06g03599 357 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 257 356 IPR005202 -
Car06g03599 357 Pfam GRAS domain family 56 257 IPR005202 -
Car06g03599 357 ProSiteProfiles GRAS family profile. 47 355 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03599 Car-Chr6 67335101 67336402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03599 229 357 GRAS Transcription Factor Family AT1G07520 56.154 9.79e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car06g03599 GRAS 1.2e-53 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03599 - - gsj:114377142 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03599 06 67335101 67336402 Car06g03599 06 67335101 67336402 ECH
Car06g03599 06 67335101 67336402 Car01g02593 01 51615937 51618587 ECH
Car01g02592 01 51608439 51611565 Car06g03599 06 67335101 67336402 PCT