Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03597 ATGGATCCTCGTTTCAATTCCAATTACACCAACGGTTTTACCTTAGATGTAGAGAATCAGACCTTTGAATTTATGGATAACCCTTTTCTTCTTCCACTTAATTCAAACAATACTCAAAACCctacttcaactactactactactactactGAAGAGGATTCTCCTTTAGATGAAACTGATTTCTCTACTACTGTTCTTCGTTACATAAACCAAATGCTTATGGAAGAAAACATGGAGAAGAAACCATGTATGTTTCATGATTCTTTGGCTCTACAAGCTGCTGAGAAATCTTTCTATGATGTCATTGGTGAGACATACCCTTCTTCTTCAATTCAAAATCATCATAATGTTGAAAGTCCTGATGATAGTCTTAGCAGTAACTTCAGTAGTTATAGCAATTGTGGTACTAATAGTACTACCAACTCTGTTGAATCTTGTTGGAGTAGTTTTGATTTTTCTGAGTATAAGCCTTCTATATTGCAAACCACTTTTCCTTCTGATTTTGTTTTTCAAGCTAGTTCAATGAATGgtactagtagtagtagtagtagtagCAATTTCAATGTAACAACCAATAATGGATTCTTGGTAAGTTCTAGGGATGGATTTTGTGATTCGAACTTGCTTAGTAAGAGTGAGTCTGTATTGCAATTTGAGAGGGGTGTGGAGGAAGCTAATAAGTTTCTGCCTAAAGTGAATCCCTTGGTTATTGATCTAAAGAAGAATTCTTTTGTCCCTTCTTTTAGAAAGGTTTCTCAAGAGGTAGTAGTTAAGACGGAGAGTAATGAAAGGGAGCATTTTTCTCCTGAGTCGAGGGGGAGGAAGAATCATGAGAGGGAAGATGAAATGGATTTCCAAGATGAGAGAAGTAATAAGCAGTCAGCTGTTTACACTGATGATGGCAGTGAGCTATCCGAGCTATTTGATAATGTTCTGCTGGGTGTGTGCTCAGGTTGTGGAAATAGAGGAGCTCCTACTTGTGGTAGTAAGGAAGAGCAGCCTAATGGAACGGACGTGAGTGTTCAGCAGAAAGAAGAAGTAAAGGGTTCTGGTGGTGGAAAGAGTCGTGCTAAGAAACAAGGAAATATAAAGGGTGTTGTGGATCTGAGAACAATGTTGGTTCGGTGTGCACAATCTGTTTCTTCTGATGATCGTTCAACTTCTCTGGAGTTATTGAAGCAGATAAGGCAACATTCTTCTCCACTAGGTGATGGATCTCAGAGGCTGGCACATTGCTTTGCCAATGCCCTTGAGGCGCGCTTGGCTGGCACCGGGACTCAGATTTATACTGCTTTATACTCCAAAAGAACCTCTGCTGCTGACATGGTGAAAGCTTACCAAATGTATATTTCAGCTTGTCCATTCAAGAAGCTTGCAATCATTTTTGCAAACCATACAATTTTGAATCTAGCCAAGGAAGTAGAAACTCTTCACATTGTAGATTTTGGCATCCGTTATGGCTTCCAATGGCCTGCCCTTATTTATCGTCTGTCAAAACGACCTGGTGGGCCTCCCAAGCTGCGCTTGACAGGGATAGAGCTCCCTCAACCTGGCTTCAGGCCTGCGGAGAGGGTCCAGGAGACAGGACTTCGCTTGGCAAGGTATTGTGAACGTTTTAATGTTCCATTTGAGTTCAATGCTATTGCACAGAAATGGGAAACCGTCAAAGTTGAGGACTTGAAGATACAGAGAAATGAACTTCTTGTAATGAATTGTTTATGTCGATTTAAATATCTACTTGATGAGACAGTAGTGTTGAATAGTCCCAGGGATGCTGTTTTAAAATTAATTAGGAAGGCAAATCCCAGTATCTTTATACATACTACTGTCAATGGGAGCTATAATGCCCCATTCTTTGTGACACGGTTCAAGGAGGCTCTTTTCCATTACTCTACCATGTTTGATGTGCTTGACATCAATGTTGCCTGTGAAGATCCAATGAGGTTGATGTTCGAGAAAGAGTTCTTTGGACGTGAGGTAATGAATACTATCGCTTGTGAGGGTTCCCAGAGGGTCGAGAGGCCAGAAACATACAAGCAATGGCAGGTTCGGAACATAAGGGCTGGATTTAAGCAACTGCCCTTGGATAAACAACTCATCAACAAGTTAAGATGCAAGTTGAGAGATGTATACCACAGTGATTTCATGCTTGTTGAAGATGGAAACTGCATGTTGCAAGGTTGGAAGGGTCGAATAGTTTATGCTTCCTCCTGTTGGGTACCTGCATAG 2229 0.3988 MDPRFNSNYTNGFTLDVENQTFEFMDNPFLLPLNSNNTQNPTSTTTTTTTEEDSPLDETDFSTTVLRYINQMLMEENMEKKPCMFHDSLALQAAEKSFYDVIGETYPSSSIQNHHNVESPDDSLSSNFSSYSNCGTNSTTNSVESCWSSFDFSEYKPSILQTTFPSDFVFQASSMNGTSSSSSSSNFNVTTNNGFLVSSRDGFCDSNLLSKSESVLQFERGVEEANKFLPKVNPLVIDLKKNSFVPSFRKVSQEVVVKTESNEREHFSPESRGRKNHEREDEMDFQDERSNKQSAVYTDDGSELSELFDNVLLGVCSGCGNRGAPTCGSKEEQPNGTDVSVQQKEEVKGSGGGKSRAKKQGNIKGVVDLRTMLVRCAQSVSSDDRSTSLELLKQIRQHSSPLGDGSQRLAHCFANALEARLAGTGTQIYTALYSKRTSAADMVKAYQMYISACPFKKLAIIFANHTILNLAKEVETLHIVDFGIRYGFQWPALIYRLSKRPGGPPKLRLTGIELPQPGFRPAERVQETGLRLARYCERFNVPFEFNAIAQKWETVKVEDLKIQRNELLVMNCLCRFKYLLDETVVLNSPRDAVLKLIRKANPSIFIHTTVNGSYNAPFFVTRFKEALFHYSTMFDVLDINVACEDPMRLMFEKEFFGREVMNTIACEGSQRVERPETYKQWQVRNIRAGFKQLPLDKQLINKLRCKLRDVYHSDFMLVEDGNCMLQGWKGRIVYASSCWVPA 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03597 742 ProSiteProfiles GRAS family profile. 360 740 IPR005202 -
Car06g03597 742 PANTHER SCARECROW-LIKE PROTEIN 14 36 741 - -
Car06g03597 742 MobiDBLite consensus disorder prediction 30 52 - -
Car06g03597 742 Pfam GRAS domain family 369 739 IPR005202 -
Car06g03597 742 MobiDBLite consensus disorder prediction 259 298 - -
Car06g03597 742 MobiDBLite consensus disorder prediction 28 58 - -
Car06g03597 742 MobiDBLite consensus disorder prediction 324 361 - -
Car06g03597 742 MobiDBLite consensus disorder prediction 328 344 - -
Car06g03597 742 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 741 IPR005202 -
Car06g03597 742 MobiDBLite consensus disorder prediction 259 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03597 Car-Chr6 67326634 67329308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03597 65 742 GRAS Transcription Factor Family AT1G07530 56.356 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car06g03597 GRAS 1.4e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03597 - - mtr:MTR_4g064160 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03597 06 67326634 67329308 Car06g03597 06 67326634 67329308 ECH
Car03g01129 03 53348811 53351976 Car06g03597 06 67326634 67329308 ECH