Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03593 ATGAAGTGTTTCCATTTCTCCAACGGAAGTGAGAAAAGAGGAGTTGAAGACGAAGAAGCTTCGGCTTCAAGCTCCCGAACTTCAAGGGTCTCATGGGCGCGTTCTCTCAGCTTAATGGACTCACGCCGTTCCGAATTCGACTCAGATTCAAGAGACTTCTCCGATACGCTCGGCTTCCACGAGTTTCTCTCTCAGCGTCGAGCCAATCACCTTCACCTCTTCTCCTTCTCCGACCTTAAACTCGCCACTCGTGGATTCAACAGAAGCCTCTTAATCGGTGAAGGTGGCTTCGGTTCTGTTTACAGAGGCACCGTTAATCATCGTTCCCAAATCGATGTTGCCGTTAAACAGTTAAATCGTAACGGTCATCAGGCACGTTTTCCTCTTTTTTATTTTATTTTAAAAATTGATTTTCAGGGGCATAAGGAATGGATTAATGAAGTTAATTTATTGGGGGTAATTAAGCATCCAAATCTGGTGAGATTAGTGGGTTATTGTGCTGAAGATGATGAAAGAGGGATTCAAAGGCTTTTAGTGTATGAGTTTATGCCTAATAAGAGTTTGGAAGATCATCTTTTGGTTCGTGTTCCTTCATCGGTTCTTCCTTGGATGACTAGATTGAAAATTGCTCAAGATGCAGCTCGTGGTTTGGCATACCTGCATGAAGAAATGGATTTTCAGCTAATATTTCGAGATTTTAAAACATCCAACATCTTGCTGGATGAGGACTTCAATGCAAAGCTTTCTGATTTTGGACTCGCTAGGCAAGGACCCTCAGAAGGGTTTGGCTATGTTTCAACAGCAGTTGTTGGCACCATAGGATATGCTGCACCAGAGTATGTTCAGACTGGTAAGCTGACTGCTAAGAGTGATGTCTGGAGCTTTGGTGTAGTTCTTTATGAGCTTATCACCGGAAGGAGAGCCGTAGAAAGAAACCTACCGAAAAACGAGCAAAAGCTTTTGGAATGGGTAAGACCTTATGTATCTGATCCTAAGAAGTTCCATCATATTGTCGATCCTCGACTTGAAGGACAGGATTGCACCAAATCAGCTCATAAACTTGCAATCCTAGCAAACAAGTGTCTCATGAAGCAGCCAAAGTCTCGCCCGAAAATGAGTGAGGTGGTTGAGATTCTTGGAAACATTATCAACGAGACTGTTCCTATGGATGAATGCATTTCCGAAACTGTTGCAGAAACTCAAGAAGAACAAGAAGTAAATTTATCTGTAGAGGATGCTGAACCTGAACCAGCTAAACAGGGGAATAATTATCTGAAGAAGGTTTTTGAATTCAGAGATATGGTCAGCTTAAGAAATAAATCCATTGGAAAGTTTGATTGGAAAAGTTGGGCGCCTGGGCTTGTAAGAACTTGGTGA 1377 0.4241 MKCFHFSNGSEKRGVEDEEASASSSRTSRVSWARSLSLMDSRRSEFDSDSRDFSDTLGFHEFLSQRRANHLHLFSFSDLKLATRGFNRSLLIGEGGFGSVYRGTVNHRSQIDVAVKQLNRNGHQARFPLFYFILKIDFQGHKEWINEVNLLGVIKHPNLVRLVGYCAEDDERGIQRLLVYEFMPNKSLEDHLLVRVPSSVLPWMTRLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDFNAKLSDFGLARQGPSEGFGYVSTAVVGTIGYAAPEYVQTGKLTAKSDVWSFGVVLYELITGRRAVERNLPKNEQKLLEWVRPYVSDPKKFHHIVDPRLEGQDCTKSAHKLAILANKCLMKQPKSRPKMSEVVEILGNIINETVPMDECISETVAETQEEQEVNLSVEDAEPEPAKQGNNYLKKVFEFRDMVSLRNKSIGKFDWKSWAPGLVRTW 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03593 458 ProSiteProfiles Protein kinase domain profile. 86 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03593 458 ProSitePatterns Protein kinases ATP-binding region signature. 92 116 IPR017441 GO:0005524
Car06g03593 458 PANTHER OS01G0588500 PROTEIN-RELATED 22 437 - -
Car06g03593 458 MobiDBLite consensus disorder prediction 1 27 - -
Car06g03593 458 CDD STKc_IRAK 92 382 - -
Car06g03593 458 Pfam Protein kinase domain 90 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03593 458 MobiDBLite consensus disorder prediction 1 23 - -
Car06g03593 458 Gene3D Transferase(Phosphotransferase) domain 1 183 405 - -
Car06g03593 458 SUPERFAMILY Protein kinase-like (PK-like) 67 379 IPR011009 -
Car06g03593 458 Gene3D Phosphorylase Kinase; domain 1 64 182 - -
Car06g03593 458 PANTHER BNAA07G14290D PROTEIN 22 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03593 Car-Chr6 67261351 67264376 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03593 74 380 Glycoside Hydrolase AT3G07070 50.000 1.08e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car06g03593 Pkinase 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03593 - - gmx:100811825 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03593 06 67261351 67264376 Car06g03593 06 67261351 67264376 ECH