Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03592 ATGGGAATTAATTTAATATCTGCCATGGGAGTTTGTTTGGGCAACCAAATCAAAGTTGAAAACCCATTTAATTCTGTTTCAGGGTTAAGTTCAAAGAGTGTGAATGGCAATACAGAAGATCTGAGTATTCCATGTTGTAAGGTTTCTGATGATCACAGTAGCTCAATTGGTGAGGTATCAGCGACGTCGGTATCAGTGACTCAAACTCCCCGGAGCGTGGGGGAGATCTTGCAATCATCAAATTTGAAGAGCTTTACATCGACTGAACTTCAGGCTGCCACTAGAAATTTTCGTGTAGACAGTGTGTTAGGAGATAGTGGTTTTGGATCAGTTTTTAAGGGTTGGATTGATGAACACACACCTTCTGCTGCCAAACCAGGTGAAGGCATTGTTGTTGCTGTCAAAAGAGTTTATCAGGATGGCTTCAAATGTCACAAGGAGTTGCTGGCTGAAGTCAACTATCTAGGCCAGCTTTCTCACCCTCATCTAGTGAAATTGATTGGATATTGTATTGAAGATGAAAACCGTTTTCTGGTCTCTGAGTTTATGCCACGTGGCAGCTTGGAGAATCACTTGTTCATGAGAGGCTCATACTTTCAACCTCTTTCTTGGAGCCTACGTTTGAAAGTTGCTCTTGGTGCTGCCAAAGGCCTTGCATTTCTTCATAGGGCTGAAACAAAAGCGATATACCAAGATTTCAAGACTTCAAATGTCTTGCTAGATTCAGATTATAATGCAAAACTTTCTCATATTGGGCTGCCAAAGAAAAGGCCTATGGGTGATAAAAATCGTACCTCTACCAAGCTAACCTATGAATATGCAGCTCCAGAATACCTAGCCAATGGTAATCACACTACTAAGAGTGATGTCTATAGTTTTGGAGTTGTTCTACTGGAAATATTATCAGGAAGGAGAGTTATTGACAAGAATAGACCACACAAACAACACAATTTGGTGGAATGGGCTAGGCCTTATCTATCCAACAAGCGTAAGGTTTTGCGCGTGTTGGATAATCGCCTTGAAGGCCAATATGAATTAGATGATGCCTACAAGGTTGCCACACTCTCCGTAAGGTGCATTTCAATAGAAGCAAAGTTGAGACCAAACATGGATGAGGTTGTTACAAATTTGGAGCAGCTTCAAGTTCCTCATGTAAATGGATGCAATCAAAATCGTTCACGTAGAAGAAGTGCCGGTGATGTTACAAGTGTTGGAACAGCTACAACTTCTCTCCAACGCTCTGTTTCTCTGCTTTGTACATGA 1263 0.4141 MGINLISAMGVCLGNQIKVENPFNSVSGLSSKSVNGNTEDLSIPCCKVSDDHSSSIGEVSATSVSVTQTPRSVGEILQSSNLKSFTSTELQAATRNFRVDSVLGDSGFGSVFKGWIDEHTPSAAKPGEGIVVAVKRVYQDGFKCHKELLAEVNYLGQLSHPHLVKLIGYCIEDENRFLVSEFMPRGSLENHLFMRGSYFQPLSWSLRLKVALGAAKGLAFLHRAETKAIYQDFKTSNVLLDSDYNAKLSHIGLPKKRPMGDKNRTSTKLTYEYAAPEYLANGNHTTKSDVYSFGVVLLEILSGRRVIDKNRPHKQHNLVEWARPYLSNKRKVLRVLDNRLEGQYELDDAYKVATLSVRCISIEAKLRPNMDEVVTNLEQLQVPHVNGCNQNRSRRRSAGDVTSVGTATTSLQRSVSLLCT 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03592 420 Pfam Protein tyrosine and serine/threonine kinase 99 377 IPR001245 GO:0004672|GO:0006468
Car06g03592 420 SUPERFAMILY Protein kinase-like (PK-like) 78 382 IPR011009 -
Car06g03592 420 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 54 399 - -
Car06g03592 420 PANTHER OS01G0588500 PROTEIN-RELATED 54 399 - -
Car06g03592 420 Gene3D Phosphorylase Kinase; domain 1 73 182 - -
Car06g03592 420 Gene3D Transferase(Phosphotransferase) domain 1 183 401 - -
Car06g03592 420 ProSiteProfiles Protein kinase domain profile. 97 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03592 Car-Chr6 67256853 67260720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03592 75 416 Glycoside Hydrolase AT3G07070 39.726 5.01e-84 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car06g03592 PK_Tyr_Ser-Thr 4.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03592 - - mtr:MTR_4g063930 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03592 06 67256853 67260720 Car06g03592 06 67256853 67260720 ECH
Car01g02584 01 51532341 51535480 Car06g03592 06 67256853 67260720 PCT