Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03590 ATGGGTAACGGATTAGGAAAATTAACGGTATGTTTCACCGGCAACAACGGTGGTCGGAAACATGACATATCAATTTTAATAACTGACCCTTTAGACGAAGGACTTGGTCACTCTTTCTGTTACGTTAGACCCGACCCGACCCGGTTATCTTCATCAAAGGTTCACTCCGAAGAAACAACAACCTTCAGAACAATTTCCGGCGCTTCCGTCAGCGCCAACACGTCGACTCCTCTATCAACGGCGTTCATGGATTTATACTCCTACGGTTGTTTCGATAGAGCAGCAGCTTTCGAGAGTTCAACTTCCTTCGCTTCTCTTCCTCTTCAACCGATTCCGAAGAATCTGATGGGTTCGGGTCAATTTTCCGGTAACCTCGGAGGTGGTGGGTTCGCGACTTCCGGTCCGATCGAGCGTGGTTTCATGTCCGGTCCGATCGAGCGTGGGTTTATGTCCGGTCCAATCGACCGTGGTTTATTTTCCGGTCCGATTGAAAAAGAAAGCACCGGTTCCGATCAGTTTCAGAGAAGCTTCTCTCACGGTGGTTTGGGATTCACCGTTAGACCTAGAACGAGAAAAGAAAAATGGATTCGTGTTCTTCAGAGAGCGATTTTGAAGACTCTGTCTCGTAAACAGAATTCTATGGTTAGTGTTACTCCGATCAAAGGAGTCACCGTTAAGGAGCCACCGGAGTGGATCCTTACTGCGGAAAAGCATAACGAGAATTTGACGGTGAGTAGTTTGAATTTGAGTAGTGAGGGTAGTTTGGAAGATGATGATTCATTGGGTAGTCAGAATCTTCAATGGGCTCAGGGGAAAGCAGGGGAAGATCGTGTTCATGTTGTTGTTTCTGAGGAACATGGTTGGGTTTTTGTTGGGATCTATGATGGTTTCAACGGTCCTGATGCACCTGATTATTTAATTTCAAATCTTTACTCTAATGTGCACAAAGAATTAAAAGGGTTGCTTTGGGATGATGGGTGTGCACAAGATAGTTTGAATTTCAATTCAATTGATGATGTTGATGTTGTTGAGAAAGATGATAGCTTTTTAGATTATTGTTCTCAGTGTGTTGATCAGGAGaataatagtaataataataatcatGCTTGTGTAAGTGGTGATTTGATTTTGAAGAACAAAAAAAGAGGGAAGAATTCGAAGAACAAGTACAAAGATTCGGCGAAGAAACACGAGGAGAATCAGAAGAGGTGGAAGTGTGAATGGGATAAGGAAAGGTTAGAGCTTGATAGAAGATTAAAGGAACAATTGAGTTTGAGTCGATCCGAGTCTAATGGTGGTGGCAACAACAATTGTGTTAATCATTCGGATGTTTTGGAAGCTCTTTCGCGAGCTTTGAACAAAACTGAGGAGTCTTATCTTGATGTTGCTGATAAGATGGTGATGGAGAATCCAGAACTTGCTTTAATGGGTTCATGTGTCCTTGTAATGTTGATGAAAGGGGAAGATGTTTATGTGATGAATGTTGGAGATAGTAGAGCTGTGTTGGCTCAAAAAGCTGAACCTGATTATTGGATTGGGAAAATTAGACAGGATTTGGAAAGGATTAATGAAGAGACAATGCATGATCTTGAATCATGGGATGATGCTGATAAATCAAATTCTGTTCCTAGTTTAAGTGCTTTTCAGCTTACTAAAGATCATAGTACCAATGTTGAGGAGGAAGTTACCAGAATAATAAAAGAACACCCTGATGATCCTTGTGCTGTTGTCAATGATCGTGTTAAGGGATCTCTTAAGGTTACAAGAGCATTTGGTGCTGGATTTCTCAAACAGCCCAAATGGAACAATGCACTTTTGGAGATGTTTAGAATAGACTATGTGGGAAATTCTCCTTACATAAGTTGCCAACCATATCTTAAACACCACAGATTAGGCCAAAAAGACAAATTTTTGATTTTATGCTCCGATGGACTCTATCAATACTTGTCAAACGAAGAAGCAGTTGCTGAAGTTGAGCTTTTCATCACATTGCAACCCGAAGGTGACCCAGCTCAGCATTTGGTTGAAGAAGTCTTGTTTCGTGCCGCAAAGAAAGCTGGTTTGGACTTTCACGAGTTGCTCGAAATTCCACAAGGCGATAGGCGGCGTTACCACGACGATGTTTCCATCATAGTTATTTCTTTGGAAGGAAGGATATGGAGATCATGTGTATAA 2175 0.4156 MGNGLGKLTVCFTGNNGGRKHDISILITDPLDEGLGHSFCYVRPDPTRLSSSKVHSEETTTFRTISGASVSANTSTPLSTAFMDLYSYGCFDRAAAFESSTSFASLPLQPIPKNLMGSGQFSGNLGGGGFATSGPIERGFMSGPIERGFMSGPIDRGLFSGPIEKESTGSDQFQRSFSHGGLGFTVRPRTRKEKWIRVLQRAILKTLSRKQNSMVSVTPIKGVTVKEPPEWILTAEKHNENLTVSSLNLSSEGSLEDDDSLGSQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLISNLYSNVHKELKGLLWDDGCAQDSLNFNSIDDVDVVEKDDSFLDYCSQCVDQENNSNNNNHACVSGDLILKNKKRGKNSKNKYKDSAKKHEENQKRWKCEWDKERLELDRRLKEQLSLSRSESNGGGNNNCVNHSDVLEALSRALNKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWIGKIRQDLERINEETMHDLESWDDADKSNSVPSLSAFQLTKDHSTNVEEEVTRIIKEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYISCQPYLKHHRLGQKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03590 724 PANTHER PROTEIN PHOSPHATASE 2C 16 724 IPR015655 GO:0004722|GO:0006470
Car06g03590 724 Coils Coil 387 407 - -
Car06g03590 724 CDD PP2Cc 440 715 IPR001932 -
Car06g03590 724 SUPERFAMILY PP2C-like 272 716 IPR036457 -
Car06g03590 724 Pfam Protein phosphatase 2C 368 671 IPR001932 -
Car06g03590 724 PANTHER - 16 724 - -
Car06g03590 724 SMART PP2C_4 259 713 IPR001932 -
Car06g03590 724 Gene3D - 232 720 IPR036457 -
Car06g03590 724 ProSiteProfiles PPM-type phosphatase domain profile. 258 715 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03590 Car-Chr6 67231882 67235467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03590 1 724 PP2C-type Phosphatase Gene Family AT1G07630 66.304 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03590 - - pvu:PHAVU_011G064200g 1122.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03590 06 67231882 67235467 Car06g03590 06 67231882 67235467 ECH