Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03584 ATGGACACCACCGGCAAGACTGAGATTATttcatcttcttcttcttcttcttcttcctcctcAAGATGGAACCCTACTAAAGAACAAATAAGTGTGTTGGAGAATTTGTATAAGCAAGGAATAAAGACACCAAGTGCTGAGGAAATTCAACAGATTACAGCTAGACTTAGAGTGTATGGTCACATCGAAGGGAAGAATGTTTTCTACTGGTTTcagaatcataaagctagacagagacagaaacagaaacaagaaacTATTGCTTATTTCAATCGTTTTCTTCATAGACCACAACCCATTTACACTTCTCCTAATGCTCTCTGCACACCATATTGTGTACCTCAAGCACAAAGTGAAATAAGCTATTACCCTAAAAACCAAAAAGTGCTTCTACCTGCTGCAGCAGTAAGTTACAGAAGGAACCAATCTGAGAAAGTAATGTCAAATGGCATGTCAAACATATGCAATAATCCAATGGTATATGAAGGCATGCAAATGCAACAGAGAATGTGCCATGATTATCATGAATTCAGTTACAGTAACCAAGAAACGTTGGATCTATTTCCACTGCACCCAACTGGAATCTTGGAAGGGAAAACAACAACAGAGCATGTTTCAGTTTCTGCTGATGATAGTTCTTCTGATACACATCATTCTGGTTCTCCTGATATCATTCAAGATCATGATAACCAACCTTTCTTTGACTTTTTTAATAATTCTGGAAAAAGTTGTTGA 735 0.3347 MDTTGKTEIISSSSSSSSSSSRWNPTKEQISVLENLYKQGIKTPSAEEIQQITARLRVYGHIEGKNVFYWFQNHKARQRQKQKQETIAYFNRFLHRPQPIYTSPNALCTPYCVPQAQSEISYYPKNQKVLLPAAAVSYRRNQSEKVMSNGMSNICNNPMVYEGMQMQQRMCHDYHEFSYSNQETLDLFPLHPTGILEGKTTTEHVSVSADDSSSDTHHSGSPDIIQDHDNQPFFDFFNNSGKSC 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03584 244 MobiDBLite consensus disorder prediction 1 24 - -
Car06g03584 244 CDD homeodomain 22 82 IPR001356 GO:0003677
Car06g03584 244 ProSiteProfiles 'Homeobox' domain profile. 16 81 IPR001356 GO:0003677
Car06g03584 244 MobiDBLite consensus disorder prediction 207 229 - -
Car06g03584 244 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 11 242 IPR044555 GO:0003700|GO:0099402
Car06g03584 244 Gene3D - 20 88 - -
Car06g03584 244 SUPERFAMILY Homeodomain-like 11 87 IPR009057 -
Car06g03584 244 Pfam Homeodomain 20 80 IPR001356 GO:0003677
Car06g03584 244 SMART HOX_1 18 85 IPR001356 GO:0003677
Car06g03584 244 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 11 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03584 Car-Chr6 67085491 67086482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03584 15 243 Wox Gene Family AT5G59340 40.239 7.24e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Car06g03584 Homeodomain 3.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03584 - - pvu:PHAVU_011G064900g 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03584 06 67085491 67086482 Car06g03584 06 67085491 67086482 ECH