Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03582 ATGGCGAAGACACTCATTTCATCTCCATCGTTCATCGCCACGCCGCTTCCTTCACTTCACCGCAATTTCTCACCTCATCGCACTAGGCTAGTCACAAAGGTTCACTTCAGCTTCCACCAACTTCCCCCAATTCAATCCATAAGTCATTCCGTTGACTTTGCCGGAATCGTTTCAAGGGCTGAAGGTCTTCTTTACACGCTCGCCGACGCTACTGTTGCGGCGGATGCTGCGAATTCCGCTGATGCTTCTGTGCAGAAGAACGGAGGTTGGTTCGGCTTCATCTCCGATGGTATGGAGTTTGTTCTCAAGGTGTTAAAAGATGGTTTGACTGCCGTACATGTGCCTTACTCATATGGATTTGCTATCATATTGCTCACTCTTATTGTTAAGGCCGCTACACTTCCCTTGACAAAGCAACAGGTTGAATCAACACTAGCTATGCAAAACCTTCAACCTAAAATTAAGGCCATTCAAGAAAGATATGCCGGTAATCAGGAAAGAATACAACTTGAGACTTCAAGGCTATATACGCAGGCTGGAGTTAACCCATTGGCAGGTTGTTTACCAACTTTGGCTACAATTCCAGTCTGGATTGGTCTATACCAAGCTTTATCTAATGTGGCAAATGAGGGACTGTTAACAGAAGGTTTCTTATGGATCCCTTCCCTGGGTGGTCCCACTTCCATTGCTGCTAGACAAAGTGGATCCGGAATTTCTTGGCTTTTTCCGTTTGTGGATGGCCATCCACCTTTGGGTTGGAATGACACTGCAGCATATCTTGTTTTACCCATTCTTCTTATTGTTTCTCAGTACGTTTCAATGGAAATCATGAAACCACCTCAGACAAATGATCCTTCTCAAAAGAATACACTTCTTATTTTCAAGTTTCTCCCTCTCATGATTGGCTATTTCTCACTATCTGTGCCATCAGGACTAACAATTTACTGGTTTACAAACAATGTCCTGAGCACAGCTCAACAAATATGGCTGCGGAAATTAGGAGGTGCAACACCTGCTGTTAATGAAAATGCTGGTGGAATTATTACTGCAGGACGAGCTAAAAGATCAGCTTCTAAACCAGAAAGGGTTGGTGAAAGGTTTACGCAATTAAAAGAAGAGGAGAAGAAAAAGTTAAGCAAGGCACTGCCAGTGGAGGAAGTTCAGCCTCTGGCTTCTGTTTCTGATGATGGCCCAGATGTAGAAAACGACAAGGAACAAGAAGTTACAGAAGAGGCATATGCTTCTAACATTAGCCAAGAGAAGAAGCAAGCGTTCAAAGCGGAAGCGTGCTGTATGATAATGGACCACATACAATTGTTTGTAGTTTCTAggcatgttacatcgTTCGATGCTATAAAAAGTAGGTGGTGTTATTTAATGGAAGAGAAACAAGAATCAAACCAAGATTTTCACTTGGAATGTAGTAGGAGCATGATGGATTTTTTAGAAGAACTCCTGTGGATCATGCCGTAG 1473 0.4263 MAKTLISSPSFIATPLPSLHRNFSPHRTRLVTKVHFSFHQLPPIQSISHSVDFAGIVSRAEGLLYTLADATVAADAANSADASVQKNGGWFGFISDGMEFVLKVLKDGLTAVHVPYSYGFAIILLTLIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWNDTAAYLVLPILLIVSQYVSMEIMKPPQTNDPSQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQIWLRKLGGATPAVNENAGGIITAGRAKRSASKPERVGERFTQLKEEEKKKLSKALPVEEVQPLASVSDDGPDVENDKEQEVTEEAYASNISQEKKQAFKAEACCMIMDHIQLFVVSRHVTSFDAIKSRWCYLMEEKQESNQDFHLECSRSMMDFLEELLWIMP 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03582 490 PANTHER OXA1 1 422 IPR001708 GO:0016021|GO:0032977
Car06g03582 490 Pfam 60Kd inner membrane protein 118 332 IPR001708 GO:0016021|GO:0032977
Car06g03582 490 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 422 - -
Car06g03582 490 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 117 331 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03582 Car-Chr6 67025897 67033740 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03582 23 387 Chloroplast and Mitochondria Gene Families AT2G28800 68.449 9.63e-180 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03582 K03217 - gmx:100817173 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03582 06 67025897 67033740 Car06g03582 06 67025897 67033740 ECH