Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03568 ATGTCTTTACAAAACAAGGGATTCTGGATGGTAAAAGGATCTGGACATGTTAGTGACAGGGAGCAAGTATTTGATAATCCTTCCAAAATTGAACCAAAACGGCCTCATCAATGGTTAGTTGATGCCACTGAATCGGATTTTTTGCCAAACAAAAAGCAAGCAATAGAAGATGCAAATGAAAAATCTAGTTCAGGATTTTCAAATGTAAATTTTACTCCATGGGAGAACAATCACAATTTTCAAACAGTCCCAAACCAGTTTATTGGTCGATTATTTGGGTCTGAAACTAGGCCTGTCAATTTCACTGAAAAGGATACATATGTTTCGCCTAATGATTCTAATGTGAGATCTAAGATGATCGCCAACCATTATGGAAGTGATGCATCTTTTGGCTTGTCTATATCTCATTGTTCTGAAGATTCTGAAGCATGTATGAACTTTGAGGGAATCAAGAAAGTCAAAGTAAACCAGGTTAAGGATTCTGATGGTGTACAAGCTCCAGAGGGACATAATTTTGATCTACATCAAGCCTATAATGGTGAAGTTGAGACAAGATCTGGATCAATAGGGCAAACCTTTGACAAGAATGACAATGCCACTTTAATGGGACTCACTTATGGCAGAGGGGATGCTCATAATGCTCATATCGGATCATTTGGTACCCCTTTTGGTAAAGGAGATAACACAGTCCTATCAATTGGTGAATCCTATAATAAAGATGCAAATATAATTTCTTTTGGTGGGTTCCCAGATGATCGGGACATTATCTCTGTGGGCAGGGCTGCTGCAGATTATGAACAATTATATAATCAATCATCAGTTCATGTGTCAACAGCTGCTCATGAGAATGAGTTGGATGCATCAAATGCTGATGCAGTTGCATGTTCTCCTTCGGTGGCAACAATAAAGTCTGAATCTGTGTCCAAGAATAAACAAGATACCAAAACAAGGAAAGAATCTCCAAACACCTTCCCTTCTAATGTCAGGAGCTTGATATCTACTGGTATGCTTGATGGTGTTCCTGTGAAGTATGTCTCAGTGGCGCGGGAGGAACTTCGTGGAATTATAAAAGGCTCTACCTATCTTTGTGGGTGTCAGTCATGTAACTATTCTAAGGGTCTGAATGCTTATGAGTTTGAAAGACATGCCGGTTGCAAATCGAAACATCCAAACAATCATATTTATTTTGATAATGGGAAGACCATTTATCAAATAGTACAGGAATTGAGGAGTACCCCTGAAAATTTATTGTTTGACACAATCCAAACAATATTTGGTGCACCAATTAACCAGAAAGCATTTCGCAATTGGAAAGGTAAAGAAATTCCTGACCTCTCCACTGTAAGCTCAAACACACTAACTGCTGATACCAAAGGTTGA 1380 0.3862 MSLQNKGFWMVKGSGHVSDREQVFDNPSKIEPKRPHQWLVDATESDFLPNKKQAIEDANEKSSSGFSNVNFTPWENNHNFQTVPNQFIGRLFGSETRPVNFTEKDTYVSPNDSNVRSKMIANHYGSDASFGLSISHCSEDSEACMNFEGIKKVKVNQVKDSDGVQAPEGHNFDLHQAYNGEVETRSGSIGQTFDKNDNATLMGLTYGRGDAHNAHIGSFGTPFGKGDNTVLSIGESYNKDANIISFGGFPDDRDIISVGRAAADYEQLYNQSSVHVSTAAHENELDASNADAVACSPSVATIKSESVSKNKQDTKTRKESPNTFPSNVRSLISTGMLDGVPVKYVSVAREELRGIIKGSTYLCGCQSCNYSKGLNAYEFERHAGCKSKHPNNHIYFDNGKTIYQIVQELRSTPENLLFDTIQTIFGAPINQKAFRNWKGKEIPDLSTVSSNTLTADTKG 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03568 459 MobiDBLite consensus disorder prediction 304 323 - -
Car06g03568 459 PANTHER AUTOIMMUNE REGULATOR 1 439 - -
Car06g03568 459 Pfam Tify domain binding domain 354 409 IPR032308 -
Car06g03568 459 PANTHER DNA-BINDING PROTEIN 1 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03568 Car-Chr6 66911523 66915579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03568 317 439 PHD Transcription Factor Family AT3G53680 50.806 6.91e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03568 - - gmx:100802229 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03568 06 66911523 66915579 Car06g03568 06 66911523 66915579 ECH