Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03565 ATGACTCCACAAGAACAACACCTTGTCTTGGACCTTCACTCTAAATGGGGAAATAGATGGTCAAGAATTGCTAGAAAGCTACCGGGACGAACAGACAATGAGATAAAGAATTATTGGAGGACACACATGAGGAAGAAAAGGGCACAAGAGAAAAAGAATGAAACACCTTCAATTTCATCATCACCTGAATCTTCTAGTTGTCAATCTTCACATTCATCAAATAATAATAACCATGGTGTGGATTCACATGATGGTTCTAAAGATGGTGGAGAAGAAAGCTTTTATGAAAACCAAGTACAAGAAGATATTGAACAGGGTTACTCTATGGATGATATATGGAAAGATATTGCTATGTCAGAAAATGACATTAATAATCTTGATAAACCTGTTTATGATGGACATAGTAGTGAACCTTTAATGCCTTCTACATCATGGGAGGATTATTCTTCAGACCCATTATGGGTTATGGATGATGAAGAAAACAACTTTTTATTCCCTATAGGTGACCAATATTTTTCCTTCTACGATCAACAAGGGAGTACATTTCTAATCGGTTAA 558 0.3584 MTPQEQHLVLDLHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKRAQEKKNETPSISSSPESSSCQSSHSSNNNNHGVDSHDGSKDGGEESFYENQVQEDIEQGYSMDDIWKDIAMSENDINNLDKPVYDGHSSEPLMPSTSWEDYSSDPLWVMDDEENNFLFPIGDQYFSFYDQQGSTFLIG 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03565 185 MobiDBLite consensus disorder prediction 54 80 - -
Car06g03565 185 Gene3D - 1 76 - -
Car06g03565 185 CDD SANT 1 43 IPR001005 -
Car06g03565 185 Pfam Myb-like DNA-binding domain 2 42 IPR001005 -
Car06g03565 185 PANTHER TRANSCRIPTION FACTOR MYB48-RELATED 1 167 - -
Car06g03565 185 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 167 IPR044676 GO:0003700|GO:0006355|GO:0043565
Car06g03565 185 SUPERFAMILY Homeodomain-like 2 49 IPR009057 -
Car06g03565 185 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 47 IPR017930 -
Car06g03565 185 ProSiteProfiles Myb-like domain profile. 1 43 IPR001005 -
Car06g03565 185 MobiDBLite consensus disorder prediction 34 95 - -
Car06g03565 185 SMART sant 1 45 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03565 Car-Chr6 66873539 66875117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03565 1 178 MYB Transcription Factor Family AT3G46130 44.845 2.39e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car06g03565 Myb_DNA-binding 1.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03565 K09422 - gmx:100776886 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03565 06 66873539 66875117 Car06g03565 06 66873539 66875117 ECH
Car06g03565 06 66873539 66875117 Car01g02558 01 51330454 51331740 PCT