Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03551 ATGGCTAGAATCAAGGTTTACGAGCTCAGGCAAAAAACAAAAGCAGACCTTCTGAATCAATTGAAGGATCTGAAAGCAGAACTTTCGCTCCTTCGCGTCGCCAAGGTCACTGGTGGTGCCCCAAATAAGCTCTCCAAGATAAAAGTTGTTAGGCTTTCGATAGCGCAGGTTTTGACTGTGATTTCACAGAAGCAAAAGTCAGCATTGAGGGAAGCTTATAAGAATAAGAAATATCTGCCTTTGGATCTCCGCCCTAAGAAGACAAGAGCTATTAGAAGACGCCTCACTAAGCACCAGCAATCTTTGAAGACAGAGCGTGAGAAGAAGAAGGAAATCTACTTCCCAATGAGAAAATATGCAATTAAGATGAAAGAAAAACTCAAGAAAATGGATTTCATTCAGTCAGCAATTCACGAGGTCCATCCCTCCCAAGTTCTTAATGTGACTTCTTCAGCCTCTTGTTTAATTTATCCAGTCTCTTTTCCTTTCCAGTGTCAACTTTCAGCATCGTTGCAAATTGTTCAAACTGATATCTACAATACTTGA 546 0.4066 MARIKVYELRQKTKADLLNQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKSALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQQSLKTEREKKKEIYFPMRKYAIKMKEKLKKMDFIQSAIHEVHPSQVLNVTSSASCLIYPVSFPFQCQLSASLQIVQTDIYNT 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03551 181 Gene3D - 78 122 - -
Car06g03551 181 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Car06g03551 181 PANTHER 60S RIBOSOMAL PROTEIN L35 1 123 IPR045059 GO:0000463|GO:0022625
Car06g03551 181 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Car06g03551 181 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 1 123 - -
Car06g03551 181 TIGRFAM L29: ribosomal protein uL29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Car06g03551 181 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
Car06g03551 181 CDD Ribosomal_L29_HIP 8 64 - -
Car06g03551 181 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Car06g03551 181 Coils Coil 7 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03551 Car-Chr6 66758202 66761119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03551 1 123 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 88.618 1.05e-72 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03551 K02918 - gmx:100801539 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03551 06 66758202 66761119 Car06g03551 06 66758202 66761119 ECH