Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03550 ATGCCTAGAAAAGGAATGAGAAGCATATTCTTCCATCAATCACTTCCTTCTGAATCCACGTCATCAAAATTCCCACCTCCCTCTCCTGTACAGACTTTCTCAGACTCCTTAATGCAAGAAAACATCGAAACCGCGGAATCACTTATAACAAAATGGGATTATTCAAACACGAATCACCAATCCAAATTATTTAGCCCTCTTTTCAGCGGCGAAACTCGCGAAGAAGCCAAACAGTACCTTAACGCTGTTAAAGGACTACAATCCGCTATGCAGTACCTTGTGAAACGTGATTCCACTTCTAACTCACTCGTTCGAGCTCAATTCTTAATGCAACTCGCTATGAAAACACTTCAAAAAGAGTTTTACCAAATACTATCAGCAAATAGAGAACATTTGGATCCTGAAACCGTTTCAAATTCTAACCGTTCATCAACCGATCGTAGAAGCAGTGTCTCCGATTACGAAGACGAAATTTCCGACGACGAGTTTCGTGTAGCCGGAAATACAATCTCCGAAACGGAAAGAGTTTCCATGCTTACTATGGCGGATTTGAAAGCTATTGCTGTTTGCATGATTTCGACTGGATACGGAAAAGAGTGTGTCAAGGTTTACATCGTTATGAGAAAATCGATTGTTGATGAAGCACTTTATCATCTCGGAGTTGAACGATTGAGTTTCTCTCAGATTCAGAAAATGGATTGGGAAGTGATTGAGTTGAAAATCAAGACGTGGTTGAACGCTGTAAAGGTTGCCGTTGGAACTTTGTTTCACGGCGAAAGGATTCTCTGCGATGAAATTTTTGCCGCTGCTTCAGGGAAGAGAATCGCGGAATCGTGTTTCGCGGAGATAACTAAAGAAGGTGCGGCTATGTTGTTTTCTTTCCCGGAAATGGTGGGAAAATGCAAGAAAACGCCTGAGAAAATGTTTAGAACTCTTGATTTATACGAAGCTATGTTTAATCACTGGATACAAATTCAATCCATATTCTCGTTTGAATCAACGGCTAACGTCCGTTTACAAGCCGTTACGTCGTTGGTGAAACTCAAAGAAGCCGTTAGAACAATGTTAACGGATTTCGAAACAGCTATTCAGAAAGACTCTTCTAAGAAACAAGTCCCTGGCGGTGGGGTCCACCCGCTAACTCGCTATGTCATGAACTACATCACTTTCCTCGCCGATTACAGCGGCGTGCTTACTGATATCGTCGCCGATTTGCCGCAATCTCCGTTGCCAGAATCTTACTATCGAAGCCCTGTGCGCGGCGAGAATCAGAAATCTTTGGAGATATCGGAGAAAATCGCGTGGCTTATACTTGTTCTTCTCTGTAAACTTGACGGAAAAGCAGAGCTCTGTAAAGACGTATCGCTTTCTTATCTTTTCCTCGCTAATAACATGCAATACGTCGTCGTTAAGGTTCGAAGATCAAACCTAGGGTTTATTCTCGGTGAAGATTGGTTAACGAATCACGAATTGAAGGTTAGAGAGCACGTGTCGAAATTCGTACACGTTGGATGGAACAAAGTATTTTCGACGTTGCCGGAAAATCCAACGGTGGAGATACCGTTGGAGCAAGTTAGGGCTAGTTTCGTGAACTTTCACAATGCGTTTGACGAAGAGTGTAGAAAACAGTGTTCGTGGATTGTTTCTGATTCGAAACTGAGAGATGAAATCAAAGTCGCGATAGGTTCGAAGCTCGTGGGGAAGTATGGTGCGTTCTACGAGAAGAATCGGGTCGGGTCGGAGTCGGTTATAAGATATAAACCGGAATATATAGAGAATTGTTTGTGTAACATTTTATATGGGGTTGGAGATTCGGGTAGTATGTCGTCATATTCTTCGTCGACGACGTTGTTTTCTCGTGGTGGCTCTAGTCGCCGAACTTTGGATGACACACCAATGACGAGAATCAAGGGCAAGACCTCATATTGTTTATGTAAGATGAATGTATTTCATTTTAATGACTTTGTCGGCGATATGTCGTGA 1983 0.4251 MPRKGMRSIFFHQSLPSESTSSKFPPPSPVQTFSDSLMQENIETAESLITKWDYSNTNHQSKLFSPLFSGETREEAKQYLNAVKGLQSAMQYLVKRDSTSNSLVRAQFLMQLAMKTLQKEFYQILSANREHLDPETVSNSNRSSTDRRSSVSDYEDEISDDEFRVAGNTISETERVSMLTMADLKAIAVCMISTGYGKECVKVYIVMRKSIVDEALYHLGVERLSFSQIQKMDWEVIELKIKTWLNAVKVAVGTLFHGERILCDEIFAAASGKRIAESCFAEITKEGAAMLFSFPEMVGKCKKTPEKMFRTLDLYEAMFNHWIQIQSIFSFESTANVRLQAVTSLVKLKEAVRTMLTDFETAIQKDSSKKQVPGGGVHPLTRYVMNYITFLADYSGVLTDIVADLPQSPLPESYYRSPVRGENQKSLEISEKIAWLILVLLCKLDGKAELCKDVSLSYLFLANNMQYVVVKVRRSNLGFILGEDWLTNHELKVREHVSKFVHVGWNKVFSTLPENPTVEIPLEQVRASFVNFHNAFDEECRKQCSWIVSDSKLRDEIKVAIGSKLVGKYGAFYEKNRVGSESVIRYKPEYIENCLCNILYGVGDSGSMSSYSSSTTLFSRGGSSRRTLDDTPMTRIKGKTSYCLCKMNVFHFNDFVGDMS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03550 660 MobiDBLite consensus disorder prediction 133 147 - -
Car06g03550 660 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 605 IPR004140 GO:0000145|GO:0006887
Car06g03550 660 Pfam Exo70 exocyst complex subunit 243 595 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car06g03550 660 MobiDBLite consensus disorder prediction 133 155 - -
Car06g03550 660 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 23 605 - -
Car06g03550 660 SUPERFAMILY Cullin repeat-like 60 596 IPR016159 -
Car06g03550 660 Gene3D Exocyst complex component Exo70 55 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03550 Car-Chr6 66749637 66751978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03550 25 601 EXO70 exocyst subunit family AT5G59730 48.837 2.05e-179 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03550 K07195 - gmx:100808078 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03550 06 66749637 66751978 Car06g03550 06 66749637 66751978 ECH