Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03542 ATGACTTTACCAAAAAAAATCAGGTTCATTGCCATTTGGTTGCCAGCAGTGAAAAAGAACCTCGCAAGCAAGCATATGTTAATAATATCCATCCATCTGCTACCTATGCTTCCTACTAATATTATAATAACAACACGAGATTCAGTGATTATGGTTTCACTCCAATTACCAGCTAAGCCACCTGAACCTAAAGCTGGTACTTCACTTTTTTCTTGGTTCTTCTTCTCTTCTCAAGATAATTACCTTATAGATTGTGGCTCACACACAAATACTTCAATTGGTAACCAAAATTTCACATCTGATAATTTCTTTAAGAATTTCCTTTCCACACAAGAAGATATTCTTGCAAATACTTCCTTAAAATCAATCACTTCCACCAATGTTTCACCTCTCTATCAAACAGCAAGAATCTTTAACTCACCTTCAAAGTTCACATTTCCTGTTAACAAAAAAGGTAGGCATTGGATCCGTCTTTATTTCTTTCCGATTTCGTATGGAAAATACAATCTTAGTGCAGCAAATTTTGCTGTTACCACCCAAAACAATGTGCTTCTTAGTAACTTTAGTGTGCCGAAAAATCCTGTTATGAAGGAGTACTTAGTAAATGTTACTTTAGACAACTTTGTCATCACTTTTACCCCTTCCAACAATTCTGTCGCTTTTGTGAATGCAATTGAAGTTGTTTCTGTGCCTGATGACCTTATTGTCGATGATGCTTTAGCCTTAAATCCGCGAAGCGGATACTCGGGGTTGTTGACACAGGCACTCGAGACAGTTATCAGAGTTAACATGGGTGGTCCAACTGTTTCCTCTGGCGCTGACCCGCTTCATCGAACTTGGGTTCCGGATACAAGCTTCCTTATACTACCTAACCTGGCTAGTAATTTTTCAAGTATAGGTGCTGTTAAATATGTAAAAGGGGGTCCAAATGAAAATACTGCTCCACCTACTGTCTATGGTACTTTAACACAGATGAACTCGAAAAGTGATCCACTTAGTAATTTCAATGTGACATGGAAGTTTGATGTGGAACCTGAATTTCAATACCTTGTTCGGTTTCACTTCTGTGACATAGTCAGTAAAGGTCTTAATGAACTCTATTTCGATGTTTACATTGATTCCTTTTTGGCTGCCAAGGATCTTGATCTCGGTGCAAAAAGTAATAATGTTTTGGCTGCTCCGTATTTTATGGATTTTGTTACATCCCCGTCTGTCGACAATAAAATTCTTATAAGTATTGGCCCTTCTGATGTAAATAATGACTATCCTAATGCCATTTTGAATGGACTAGAGATCATGAAAATTAACAACTCTATGAGCAGTCTCAGTGCATCAACAGCTGTATTTCCCACCGGAAATCATGGTTCGAATTCTCAGAAAGTTGGTGTGATAGTTGGCGTGAGTCTTGGGATACTTTGTGCGGTAGCCATGGTTGGAATTTTCTTGGTACTCTCCAAGAGAAGAAGACAGTTGTTGGCACAACAAGGTCATTCGAAGACATGGGTTCCTTTATCGATCAACGATGGAACTTCTCACACAATGGGAAGTAAATATTCATATGGAACAACAGCGAGCGCTGCTTCGAACTTTGGATACCGCTTCCCATTTGTGGTAGTTCAGGAGGCCACAAACGGTTTTGATGAGAGTTGGGTTATTGGTATAGGTGGTTTTGGTAAGGTATACAAAGGCGAATTAAACGATGGAACAAAAGTTGCTTGTAAGAGGGGGAACCCTCGCTCCCATCAGGGACTTGCAGAGTTCCGAACAGAAATTGAAATGTTGTCTCAGTTCCGCCATCGTCATCTGGTATCATTGATTGGATATTGTGACGAAAGGAATGAAATGATCTTGATATATGAATATATGGAGAAGGGAACTGTAAAGAGTCATCTGTATGGTTCCAATCTCCCCAGTTTAAGTTGGAAGGAGAGGCTCGAGATATGCATTGGAGCCGCCCGGGGACTTCATTACCTTCATACCGGCTATGCTAAAGCGGTTATTCACCGCGATGTAAAGTCTGCAAATATCCTTCTTGATGAAAACCTCATGGCAAAAGTTGCTGATTTCGGGTTATCAAAGACTGGACCGGAAATTGATCAAACGCATGTGAGCACGGCTGTCAAAGGTAGTTTTGGTTACCTTGATCCTGAGTATTTCAGAAGGCAACAGTTAACAGAAAAATCAGACGTGTATTCGTTTGGGGTAGTTCTGCTTGAGGTTCTGTGTGCAAGACCTGTTATTGATCCATCCCTCTCCCGAGAAATGGTGAACTTGGCAGAATGGTCAATGAAATGGCAGAAAAAAGGTGAACTGGCGCGAATCGTGGATCCAACACTTGCAGGGAAAATCAGACCAGATTCTCTTAGGAAGTTCGGAGAAACTGCCGAAAAGTGTTTGGCTGACTTTGGTGTTGATAGGCCTTCTATGGGAGATGTATTGTGGAATTTGGAGTATGCTCTTCAGCTTCAAGAGGCTGTTGTTCAAGGCGATCCCGAAGAAAACAGTACTAATATGATTGGTGAACTCTCTGCGCAGATCAACAATTTCGGCCATGAAGCAAGTGTTTCTGTTGCACAATTTGAAGCTTCAAGTCTCGATGATCTGTCTGGTGTTTCTATGAGTAAAGTATTCTCACAGCTTGTGAAGTCTGAAGGAAGATGA 2661 0.4066 MTLPKKIRFIAIWLPAVKKNLASKHMLIISIHLLPMLPTNIIITTRDSVIMVSLQLPAKPPEPKAGTSLFSWFFFSSQDNYLIDCGSHTNTSIGNQNFTSDNFFKNFLSTQEDILANTSLKSITSTNVSPLYQTARIFNSPSKFTFPVNKKGRHWIRLYFFPISYGKYNLSAANFAVTTQNNVLLSNFSVPKNPVMKEYLVNVTLDNFVITFTPSNNSVAFVNAIEVVSVPDDLIVDDALALNPRSGYSGLLTQALETVIRVNMGGPTVSSGADPLHRTWVPDTSFLILPNLASNFSSIGAVKYVKGGPNENTAPPTVYGTLTQMNSKSDPLSNFNVTWKFDVEPEFQYLVRFHFCDIVSKGLNELYFDVYIDSFLAAKDLDLGAKSNNVLAAPYFMDFVTSPSVDNKILISIGPSDVNNDYPNAILNGLEIMKINNSMSSLSASTAVFPTGNHGSNSQKVGVIVGVSLGILCAVAMVGIFLVLSKRRRQLLAQQGHSKTWVPLSINDGTSHTMGSKYSYGTTASAASNFGYRFPFVVVQEATNGFDESWVIGIGGFGKVYKGELNDGTKVACKRGNPRSHQGLAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEKGTVKSHLYGSNLPSLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEVLCARPVIDPSLSREMVNLAEWSMKWQKKGELARIVDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSAQINNFGHEASVSVAQFEASSLDDLSGVSMSKVFSQLVKSEGR 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03542 886 Gene3D Phosphorylase Kinase; domain 1 509 621 - -
Car06g03542 886 SUPERFAMILY Protein kinase-like (PK-like) 528 817 IPR011009 -
Car06g03542 886 Pfam Malectin-like domain 83 435 IPR024788 -
Car06g03542 886 SMART serkin_6 546 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03542 886 CDD STKc_IRAK 552 817 - -
Car06g03542 886 Pfam Protein tyrosine and serine/threonine kinase 551 744 IPR001245 GO:0004672|GO:0006468
Car06g03542 886 Gene3D - 78 231 - -
Car06g03542 886 Gene3D - 254 437 - -
Car06g03542 886 ProSiteProfiles Protein kinase domain profile. 546 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03542 886 Gene3D Transferase(Phosphotransferase) domain 1 622 840 - -
Car06g03542 886 PANTHER OS07G0166700 PROTEIN 68 879 IPR045272 GO:0004714|GO:0006468
Car06g03542 886 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 68 879 - -
Car06g03542 886 ProSitePatterns Serine/Threonine protein kinases active-site signature. 666 678 IPR008271 GO:0004672|GO:0006468
Car06g03542 886 ProSitePatterns Protein kinases ATP-binding region signature. 552 574 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03542 Car-Chr6 66583488 66587116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03542 75 886 Receptor kinase-like Gene Family AT3G46290 65.079 0.0 1060
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Car06g03542 Malectin_like 1.8e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03542 - - gmx:100806488 1343.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03542 06 66583488 66587116 Car06g03542 06 66583488 66587116 ECH
Car06g03542 06 66583488 66587116 Car01g02549 01 51207625 51211059 ECH