Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03537 ATGGAAGCGTTTCAAAGAGATCAACGTGGCTCACTTGAAGTGTTTAATCCTTCTTCATCTGAGAAGAACGAGAATCCAAATCCAAACAATTTGTGGAAGACTCTGATACACTCACGCGCCGAGGAAACTCCACTTCCCACGCGCAATTCCAATTCCGATGAAGTCACCGTCGCAACTTCCTGGATGGCGCTCAAGGAAACAAATCCTCCGCCAACTTCGGGCGAATCAGGCTCCGCGGCGGCGCAGAGAGCGGCGGAGTGGGGATTAGTGCTGAAAACTGATTCGGAGACAGGTAAGCCACAGGGAGTGGCGGTTAGAAACTCTGGTAGTTCGAGGAGAGACTCGAATAACTCGGTGAGAAGCTCCGGTGAGTGTTCCGATGAGGGAAAGGAGTTACGGGGAATACCGAGAGTTTCGGAGGATTTGAGAGACGCTCTATCGGCGTTTCAACAGACGTTTGTTGTTTCAGATGCTACGAAACCCGATTACCCGATTATGTATGCTAGTGCCGGGTTTTTTAAGATGACGGGTTATACTTCCAAAGAGGTCATTGGAAGAAACTGTCGATTTATGCAGGGAGCAGAAACAGATTCGAATGACGTGGCAAAGATAAGAGAGGCGCTAGCAGCTGGAAAGAGTTATTGTGGAAGGTTGCTGAATTACAAGAAGGATGGGACCCCCTTTTGGAACCTTCTCACTATTTCCCCTATCAAGGACGAACATGGCAAACTCCTCAAATTTATTGGAATGCAAGTGGAGGTTAGCAAGCATACAGAGGGGGCCAAGGAGAAGATGCTGCGTCCCAATGGATTGCCCGAATCCTTGATTCGATATGATGCTCGTGAGAAAGAGAAGGCGAACAGTTCAGTTAGTGAGTTGGTTGAAGCAGTGAGCAGACGACCGAGGGCACTCAGTGAATCAGCAAACCGTCCTTTCATAAAAAACCAAACAACACAACAACATGCTGCTGCTGCTGCATCACCCAATTCATCAAGAAGAAAATCTGAGAGTGTTGCTACTTTCTCTTCATTTAGACGCAAATCACATTCAGGTTCAGGATCACGAGGAGACGCTTTTCATTCAATGCATCCAATCCCCGAAAACAAACACAAAAACCACTACTCTCGTCGCCGCTCTTTCATGGGTTTCATCAAGAAAACTCAGTCAAACAATGAAAGCTTCAATGATGAGGATAGCTTTGAGGGCAGTGAGGATGATGAGATGCCTCATAGTTTTGATGACAAAATTACACAAAAGAGGGAAAAGAGAAAGGGTCTTGATCTTGCTACCACACTCGAACGTATTGAGAAGAACTTTGTCATTACTGATCCAAGGCTACCTGATAACCCCATTATATTTGCTTCTGATAGCTTCTTAGAGCTTACAGAGTATACTCGTGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGACCTGAAACTGATCCTACAACAGTGAAAAAAATTAGAGAGGCTATTGACAATCAAACAGAAGTTACCGTGCAACTCATTAATTATACAAAGAGTGGTAAAAAGTTCTGGAACCTGTTTCATTTGCAGCCAATGCGTGATCAGAAGGGAGAAGTACAGTATTTTATTGGAGTTCAACTTGATGGTAGTCAACATGTAGAGCCTCTTCACAACCGCATTGCAGAAGATACAGCAAAGGAGGGAGAACACGTGGTCAAAAAAACTGCAGAAAATGTTGATGATGCATTGAGAGAACTTCCTGATGCTAATTTGAAACCAGAAGATCTATGGATAAATCATTCAAAAGTTGTTCACCCCAAACCTCATAGGAGGGATGAAGCTGCTTGGAGAGCTATTCAAAAGATCATAGATAGTGGAGAGCAGATAGGCTTGAAGCATTTTAAGCCAATTAAACCTTTAGGATCAGGGGACACTGGCAGTGTCCATCTGGTGGAGCTATGTGGAACTAATCAACATTTTGCCATGAAGGCTATGGAGAAGGGTGTTATGCTCAATCGTAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTAGACATGTTGGACCACCCTTTTCTTCCTGCATTATATGCTTCCTTTCAGACCAAATCACATATTTGTTTGATCACTGATTACTGTCCTGGAGGAGAACTATTCGTGCTACTTGAAAGCCAGCCAGCAAAGGTTCTCAAGGAAGATGCAGTGAGATTTTATGCCTCTGAAGTAGTTATTGCATTGGAGTACCTTCACTGTCAAGGGATAATATATAGGGATTTGAAGCCAGAAAATGTTTTACTACAAAGCAGTGGACATGTGTCTCTAACAGATTTTGATTTGTCATGTTTAACATCATGCAAACCACAGCTTTTAATTTCACCCATCAATGACAAGAAGAAACAACAGGCTCCAATATTCATGGCTGAACCGATGAGAGCATCAAATTCGTTTGTTGGCACAGAAGAGTACATAGCTCCGGAAATTATAACAGGTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCTCTTGGAATTCTTCTATATGAAATGTTTTATGGGTATACACCATTCAGGGGAAAGAATAGGCAAAGAACATTTGCAAATATTCTCCACAAGGATCTTAAATTTCCTAAAAGTAAACAGGTAAGTCTCAGTGCAAAGCAGTTAATATATTACTTGTTGCAAAGAGATCCGACTAGCAGGTTGGGTTCAAAGGGAGGAGCAAATGATATCAAAAACCATCCCTTCTTCAGGGGCATCAACTGGGCCCTAGTTAGATGCACGAAACCTCCTGAGCTTGATGCTCCTCTCTTTAGTACAAATGAAGAAGAAAAGGAAAAGATAGCCAAATATGTAGATAATGGACAAGAGGATATGAGTGTCTTTTGA 2862 0.4305 MEAFQRDQRGSLEVFNPSSSEKNENPNPNNLWKTLIHSRAEETPLPTRNSNSDEVTVATSWMALKETNPPPTSGESGSAAAQRAAEWGLVLKTDSETGKPQGVAVRNSGSSRRDSNNSVRSSGECSDEGKELRGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFMQGAETDSNDVAKIREALAAGKSYCGRLLNYKKDGTPFWNLLTISPIKDEHGKLLKFIGMQVEVSKHTEGAKEKMLRPNGLPESLIRYDAREKEKANSSVSELVEAVSRRPRALSESANRPFIKNQTTQQHAAAAASPNSSRRKSESVATFSSFRRKSHSGSGSRGDAFHSMHPIPENKHKNHYSRRRSFMGFIKKTQSNNESFNDEDSFEGSEDDEMPHSFDDKITQKREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDPTTVKKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIAEDTAKEGEHVVKKTAENVDDALRELPDANLKPEDLWINHSKVVHPKPHRRDEAAWRAIQKIIDSGEQIGLKHFKPIKPLGSGDTGSVHLVELCGTNQHFAMKAMEKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKSHICLITDYCPGGELFVLLESQPAKVLKEDAVRFYASEVVIALEYLHCQGIIYRDLKPENVLLQSSGHVSLTDFDLSCLTSCKPQLLISPINDKKKQQAPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMFYGYTPFRGKNRQRTFANILHKDLKFPKSKQVSLSAKQLIYYLLQRDPTSRLGSKGGANDIKNHPFFRGINWALVRCTKPPELDAPLFSTNEEEKEKIAKYVDNGQEDMSVF 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03537 953 SUPERFAMILY PYP-like sensor domain (PAS domain) 440 539 IPR035965 -
Car06g03537 953 ProSiteProfiles PAS repeat profile. 138 187 IPR000014 -
Car06g03537 953 CDD STKc_phototropin_like 623 927 - -
Car06g03537 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 746 758 IPR008271 GO:0004672|GO:0006468
Car06g03537 953 MobiDBLite consensus disorder prediction 287 375 - -
Car06g03537 953 Gene3D PAS domain 152 310 - -
Car06g03537 953 SUPERFAMILY PYP-like sensor domain (PAS domain) 158 255 IPR035965 -
Car06g03537 953 SMART serkin_6 625 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03537 953 Gene3D Transferase(Phosphotransferase) domain 1 709 920 - -
Car06g03537 953 ProSiteProfiles PAC domain profile. 498 552 IPR000700 -
Car06g03537 953 CDD PAS 439 539 IPR000014 -
Car06g03537 953 Gene3D Phosphorylase Kinase; domain 1 624 708 - -
Car06g03537 953 SUPERFAMILY Protein kinase-like (PK-like) 609 927 IPR011009 -
Car06g03537 953 Pfam PAS domain 159 255 IPR000014 -
Car06g03537 953 Pfam PAS domain 447 539 IPR000014 -
Car06g03537 953 ProSiteProfiles Protein kinase domain profile. 625 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03537 953 PANTHER FLIPPASE KINASE 1-RELATED 92 950 - -
Car06g03537 953 PANTHER PHOTOTROPIN-1 92 950 - -
Car06g03537 953 Pfam Protein kinase domain 627 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03537 953 ProSiteProfiles PAC domain profile. 212 266 IPR000700 -
Car06g03537 953 SMART pac_2 215 257 IPR001610 -
Car06g03537 953 SMART pac_2 501 543 IPR001610 -
Car06g03537 953 SMART pas_2 140 209 IPR000014 -
Car06g03537 953 SMART pas_2 426 495 IPR000014 -
Car06g03537 953 ProSitePatterns Protein kinases ATP-binding region signature. 631 654 IPR017441 GO:0005524
Car06g03537 953 MobiDBLite consensus disorder prediction 92 136 - -
Car06g03537 953 MobiDBLite consensus disorder prediction 387 411 - -
Car06g03537 953 TIGRFAM sensory_box: PAS domain S-box protein 165 259 IPR000014 -
Car06g03537 953 TIGRFAM sensory_box: PAS domain S-box protein 449 539 IPR000014 -
Car06g03537 953 ProSiteProfiles PAS repeat profile. 424 497 IPR000014 -
Car06g03537 953 MobiDBLite consensus disorder prediction 11 36 - -
Car06g03537 953 Gene3D PAS domain 413 577 - -
Car06g03537 953 CDD PAS 165 254 IPR000014 -
Car06g03537 953 MobiDBLite consensus disorder prediction 309 349 - -
Car06g03537 953 MobiDBLite consensus disorder prediction 1 54 - -
Car06g03537 953 MobiDBLite consensus disorder prediction 100 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03537 Car-Chr6 66473992 66485845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03537 6 950 AGC Kinase Gene Family AT3G45780 67.907 0.0 1317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car06g03537 Pkinase 3.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03537 K20715 - gmx:100804524 1464.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03537 06 66473992 66485845 Car06g03537 06 66473992 66485845 ECH
Car01g02541 01 51127499 51138651 Car06g03537 06 66473992 66485845 PCT