Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03534 ATGAATTGCTTTTGCGTTACCGGAAAGAACCAAGTCAAAAGCAACACCCAGAACCCCACCATTTCCAATTCTACTTCCGCAAGAAATGGAAATATGGAGTCTCGGGTGAATGCGGAAAATGATGAAGTTGCTGTGGAATTGATGAATTTAACTTTAAACGACGGGGTTTCCGGTGAACCGTCGGTACAGAAATTCTCTTTTGATGAACTTATAGCTGCAACAGACAATTTTAGGTCAAGTAGCGTTTTGGGTCAAGGAGGTTTTGGCACAGTTTACAAAGGGTACTTGCCAAAACAAAAGAGTGTAGCTATAAAGCGACTTGACCCAAAAGGTGGACAAGGAACCGAGGAATTTATTGCTGAAGTGAAGACATTGTGCAAAGCAAAGCATGAAAATCTAGTCAAATTGATTGGATATTGTGCTGAGGGAGAGCACAAGCTATTAGTTTATGAGTACATGCAATGGGGATCTGTGGAAAGCCATTTGTTTGGTCGTCCACTTGGCAAACAACTTGGAGTTCTTGATTGGAACACAAGGATAAAAATAGCACTTGATGTAGCAAAGGCATTGAAGTATTTGCATGTGACAATGAATCCTCCTTATGTATACCGTGACCTAAAATGCTCAAACATTTTGTTAGAGGCTGGATATAAAGCAAAGTTATCTGATTTTGGGTTTGCTAGAATAGGCCCAATTGGTGATAAGAGACTTGTTACAACAAGGATTTTGGGCACATATGGATATTGTGCACCTGATTATATTAACACAGGTCATTTGACATTTAAGTCAGATATTTTTAGCTTTGGAGTTGTTCTTTTGGAGCTTATAAGTGGTAGAAGAGCTGTTGATGATTCAAAACCTGACGATGAAAAAGATCTGGTTTCATTGGCAAGGCCTATAATAAGAGATAGGAGCAGAATAAAAGAAATAGTTGACCCATTGCTCGAAGATAAATATCCATGGAGAGGTTTATACCAAATGATTGGTATTGCCTCATTCTGTCTTGACGTGCGTCCTAACATGAGGCCTGAAATAGCTGATATTGTCAATGCTCTACAATACGTTTATTCCAAAGGGTGTAAAGATCAACCAGAAAGTTATTCACGTTTTACTAGAGTGAGAAAAAGATCTACATCTGCAGAGAAGGGCAAAGCAAAAGTAACAAACTAG 1170 0.3889 MNCFCVTGKNQVKSNTQNPTISNSTSARNGNMESRVNAENDEVAVELMNLTLNDGVSGEPSVQKFSFDELIAATDNFRSSSVLGQGGFGTVYKGYLPKQKSVAIKRLDPKGGQGTEEFIAEVKTLCKAKHENLVKLIGYCAEGEHKLLVYEYMQWGSVESHLFGRPLGKQLGVLDWNTRIKIALDVAKALKYLHVTMNPPYVYRDLKCSNILLEAGYKAKLSDFGFARIGPIGDKRLVTTRILGTYGYCAPDYINTGHLTFKSDIFSFGVVLLELISGRRAVDDSKPDDEKDLVSLARPIIRDRSRIKEIVDPLLEDKYPWRGLYQMIGIASFCLDVRPNMRPEIADIVNALQYVYSKGCKDQPESYSRFTRVRKRSTSAEKGKAKVTN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03534 389 ProSitePatterns Protein kinases ATP-binding region signature. 83 105 IPR017441 GO:0005524
Car06g03534 389 CDD STKc_IRAK 83 349 - -
Car06g03534 389 SUPERFAMILY Protein kinase-like (PK-like) 59 353 IPR011009 -
Car06g03534 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Car06g03534 389 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 6 380 - -
Car06g03534 389 SMART serkin_6 77 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03534 389 PANTHER OS07G0668900 PROTEIN 6 380 - -
Car06g03534 389 ProSiteProfiles Protein kinase domain profile. 77 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03534 389 Gene3D Phosphorylase Kinase; domain 1 38 152 - -
Car06g03534 389 Pfam Protein kinase domain 79 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03534 389 Gene3D Transferase(Phosphotransferase) domain 1 153 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03534 Car-Chr6 66458463 66461066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03534 1 355 Glycoside Hydrolase AT3G07070 47.922 1.28e-112 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Car06g03534 Pkinase 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03534 - - cam:101494202 785.023