Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03533 ATGAACAATAATGTTGGGAAAAAAGGTTTGGCAGAACAAAATCATATGATTATTGACAGAAAAAATCTCAATAAGAGAGTTGTTAATGAAGGGTTAGGCTCTGAATCATCAACTGAAAATAACACAAGATTTAGTAAGGCAACCAAAGATGGAAACAATGGGTTGAAGGGACCGATTCAAATCCACGAGAGGTTGCAGATTTCTCAACAACCTCCTCAAAGTCCAGTTGTATTCTGGGAAAAATTTCTTCCTGTTCAATCAATAAAAGTTCTGCTGGTGGACGATGATGATTCAACACGGAATGTTGTGTGTGCTCTGTTGAGAAATTGTGGTTATGAAGTCACTACTGTTTCAAATGGTCTTCAAGCATGGAAAATCCTAGAAGATCCAGAAAATCACATTGATCTTGTTCTAACAGAGGTAGCTATGCCTGTTGTATCTGGAATAGTTCTTTTGTGCAAGATCATGAGCCACCAAACTCTGAAGAATATTCCTGTAATTATGATGTCATCTCACGATTCTATGGGTATAGTCTTTAAGTGTTTGTCGAAAGGCGCAGTCGATTTTTTAGTGAAACCTATTCGGAGGAATGAACTTAAAATCCTCTGGCAACATGTTTGGAGAAGATGCCAAAACTCTAGTGTTAGTGGGAGTGAAAGTGGAACACACACACGGAAATTTACAAAGTCAACAAGGAACTGTGCATATGAAAACAATAGTGATAGCAGTGATGAGAATGATTATGGAAGCAGAGGCTTGAGTGTTCAAGATGGAAGTGACAAAGGAAGTGGAACTCAGAGTTCATGGACTACATGTCAAGCTCAAGTTAGCAGCAGCCCTCGTCCAGTTTCATCTCATCAACAATTGCTTGATGCTCCTGATAGCACGTGTGGCCAAGTGATGCATACAAAGCCTGAAAACAGTAGTGGTATGTGGGTCCATTCCACAGACAAAGAGTTTCATGAACCGATTGATCATCCTGATGATATTGAAATGGGTAAAGATTTGGCTATGGGAATATCATCAAACGTGCCACTAAAGTATCAAGATGAGGAACTATCTAACAATCCAATACTTAAAGGGAATAATAAGATCTTTGATATAGATGGTATGCAGCTCACTAAAGGACAGAGTAATGTCGGTGGAAAAGTACAACTGGAAGATGACAGTGATAGAACCAGGATGCAGGAAAATCAGGCTATGAATGTTGGTGTTACTGACAGAAGCAATCCCGGGGCTGAAAGCAGAGATTTGCACACTCCAAATGGGTTTTCTGGTTTCGCAAAATCAAAAGCAAGTTGTTGCTTCAAACAGCATCCATCACTTGAACTAACATTGAAAAGGATGGGAGAAGTAAAAGATGCTACACATGTCACAGGTGATGACTGTAATGTTTTGCGACATTCAAATCTGTCAGCATTCTCAAAATATAATACAGCTTCTGCTTACCAGGTGATGTTTATGGTCCTCACTCCTTTGATAGCCAGACTGGAGCTTTATATATTGAGAAAAATCAAGATTTTGTATATTTCAACCCCAAATCCCAGTCATTTCATAATTAACATGAAGAAATGA 1575 0.3886 MNNNVGKKGLAEQNHMIIDRKNLNKRVVNEGLGSESSTENNTRFSKATKDGNNGLKGPIQIHERLQISQQPPQSPVVFWEKFLPVQSIKVLLVDDDDSTRNVVCALLRNCGYEVTTVSNGLQAWKILEDPENHIDLVLTEVAMPVVSGIVLLCKIMSHQTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKILWQHVWRRCQNSSVSGSESGTHTRKFTKSTRNCAYENNSDSSDENDYGSRGLSVQDGSDKGSGTQSSWTTCQAQVSSSPRPVSSHQQLLDAPDSTCGQVMHTKPENSSGMWVHSTDKEFHEPIDHPDDIEMGKDLAMGISSNVPLKYQDEELSNNPILKGNNKIFDIDGMQLTKGQSNVGGKVQLEDDSDRTRMQENQAMNVGVTDRSNPGAESRDLHTPNGFSGFAKSKASCCFKQHPSLELTLKRMGEVKDATHVTGDDCNVLRHSNLSAFSKYNTASAYQVMFMVLTPLIARLELYILRKIKILYISTPNPSHFIINMKK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03533 524 MobiDBLite consensus disorder prediction 31 49 - -
Car06g03533 524 ProSiteProfiles Rhodanese domain profile. 89 133 IPR001763 -
Car06g03533 524 ProSiteProfiles Response regulatory domain profile. 89 207 IPR001789 GO:0000160
Car06g03533 524 Pfam Response regulator receiver domain 90 200 IPR001789 GO:0000160
Car06g03533 524 PANTHER TWO-COMPONENT RESPONSE REGULATOR 29 484 IPR045279 GO:0009736
Car06g03533 524 Gene3D - 87 239 - -
Car06g03533 524 SMART REC_2 88 203 IPR001789 GO:0000160
Car06g03533 524 MobiDBLite consensus disorder prediction 31 55 - -
Car06g03533 524 MobiDBLite consensus disorder prediction 234 291 - -
Car06g03533 524 SUPERFAMILY CheY-like 86 211 IPR011006 -
Car06g03533 524 CDD psREC_PRR 90 193 - -
Car06g03533 524 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 29 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03533 Car-Chr6 66448080 66457571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03533 36 487 Response Regulator Gene Family AT5G60100 43.777 1.60e-86 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car06g03533 Response_reg 8.1e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03533 K12129 - gmx:100803462 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03533 06 66448080 66457571 Car06g03533 06 66448080 66457571 ECH