Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03527 ATGGCCGGAGTTAATCAAAACGGCGTCGCCGAGTTTGTGGCGGTTCCGACACACGGTGGACAATTCGTTCAATACAACGTATTCGGTAACCTCTTTGAAGTTACGGCTAAGTACCGTCCTCCGATCATGCCTATTGGTCGTGGCGCTTACGGAATCGTTTGTTCGCTATTGAACACGGAGACGAATGAGTTGGTTGCTGTTAAGAAGATAGCGAATGCTTTTGATAATCACATGGATGCTAAGCGTACGCTGCGTGAGATTAAGCTTCTTAGGCATTTAGATCATGAAAATGTAATTGGTTTAAGAGATGTTATTCCTCCACCCTTGCGTAGAGAGTTTAATGATGTCTACATTACCACCGAACTCATGGATACTGATCTTCATCAAATCATTCGCTCCAATCAAAATCTGTCAGATGAACACTGCCAGTACTTTTTGTATCAGATTCTTCGTGGACTGAGGTATATACATTCTGCGAACATAATCCATAGAGATTTGAAACCAAGCAACCTGTTGTTGAATGCAAATTGCGACTTGAAGATTATTGATTTTGGTCTTGCACGACCAACTATGGAAAGTGACTTCATGACAGAATATGTAGTCACAAGATGGTATAGGGCTCCCGAATTGTTGTTGAACTCCTCAGATTATACATCTGCAATAGATGTTTGGTCTGTTGGTTGCATCTTTATGGAGCTTATGAATAAAAAGCCTCTTTTTCCCGGCAAAGACCACGTTCATCAGATGCGCTTATTGACAGAGCTTCTTGGCACTCCAACTGACGCTGACATTGGGTTAGTGAAAAATGAAGATGCTAGAAGATATATCCGACAACTTCCTCAATATCCTCGTCAACCTTTAAACAGGGTTTTCCCCCATGTTCATCCCTTGGCCATTGATCTCGTCGATAAAATGTTGACAGTTGATCCCACCAGAAGAATTACAGGTAATCTTCTCATCCTGACATCACATTCATTTATGTCTCTAGAGCTAAATAAAGCAAACATCCAGGTTCATTTTAAACATTAA 1029 0.4121 MAGVNQNGVAEFVAVPTHGGQFVQYNVFGNLFEVTAKYRPPIMPIGRGAYGIVCSLLNTETNELVAVKKIANAFDNHMDAKRTLREIKLLRHLDHENVIGLRDVIPPPLRREFNDVYITTELMDTDLHQIIRSNQNLSDEHCQYFLYQILRGLRYIHSANIIHRDLKPSNLLLNANCDLKIIDFGLARPTMESDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKKPLFPGKDHVHQMRLLTELLGTPTDADIGLVKNEDARRYIRQLPQYPRQPLNRVFPHVHPLAIDLVDKMLTVDPTRRITGNLLILTSHSFMSLELNKANIQVHFKH 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03527 342 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 15 316 - -
Car06g03527 342 Pfam Protein kinase domain 44 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03527 342 ProSitePatterns MAP kinase signature. 74 177 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car06g03527 342 SUPERFAMILY Protein kinase-like (PK-like) 44 316 IPR011009 -
Car06g03527 342 SMART serkin_6 39 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03527 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Car06g03527 342 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
Car06g03527 342 Gene3D Transferase(Phosphotransferase) domain 1 123 327 - -
Car06g03527 342 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 15 316 - -
Car06g03527 342 Gene3D Phosphorylase Kinase; domain 1 22 122 - -
Car06g03527 342 ProSiteProfiles Protein kinase domain profile. 39 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03527 Car-Chr6 66303752 66307199 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03527 10 315 MAP Kinase Gene Family AT3G45640 83.987 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Car06g03527 Pkinase 5.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03527 K20536 - gmx:100801339 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03527 06 66303752 66307199 Car06g03527 06 66303752 66307199 ECH