Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03525 ATGGATCATTTCACAGATAAGTTCCCGCCAATGGATCTGATGCGTTCCGAGAAGATGACCTTTGTTCAACTCATCATTCCCGCCGAGTCCGCTCACCGAGCCATTACCTATTTAGGCCAACTCGGTCTTCTTCAATTCCGTGACTTAAATGCTGAAAAAAGCCCCTTCCAGAGAACATTTGTTAACCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTACGATTCCTCATGGATCAGACCAATAAAGCTGGGATTAAGTCTTCCTGTTCTGTTTTGAAATCAGATATATACTTGGAGGATATAGAGACACAACTTGCTGAGCATGAACATGAGATAATTGAAATGAACTCTAACAGTGAGAAACTTCAGCAAGCATATAACGAACTCCTGGAGTTCAAGATTGTGCTGCAAAAGGCATGTAGTTTTCTTGTATCAAATCATGGCCATGCCGTTGCAGAAGAGCGAGAACTGGAGGAGAATGTATACTCAAATGGAGACTTTGTTGAGACGCCATTTTTATTTGAACAGGAAACGTTGCCTGGACCATCAAAATCAAACCAATCTGGTTTAAGATTTATCAGCGGGATAATATGTAAATCCAAAGTTCTTAGCTTTGAAAGGATATTATTTCGTGCTACAAGAGGCAATATGCTCTTCAACCAGGCACCAGCTGATGAACAAATTATGGATCCTATTTCAACTGAGATGGTTGAGAAGACAGTGTTTGTTGTGTTTTTCTCTGGGGAGCAAGCAAGAACAAAGATTCTGAAAATTTGTGAAGCATTTGGTGCCAATTGTTACCCTGTTCCTGAAGATATAACTAAACAAAGGCAAATAACCCGAGAGGTTTCATCACGCCTCACTGACTTAGAGGCAACTTTGGATGCTGGGATTAGGCATCGGAATAAGGCTCTATCTTCAGTAGGAGGTCATTTAGCTAAATGGATGGACATGGTAAGAAGAGAGAAGGCTGTGTATGATACGCTGAACATGTTAAATTTTGATGTCACCAAAAAATGTCTTGTTGGAGAGGGCTGGTGTCCATTAATTGCAAAAACACAGATTCAGGAGGTACTGCAACGTGCAACTTTTGACAGCAACTCTCAAGTGGGGGTAATCTTTCATTCAATGGATGCACTGGAATCGCCACCTACATATTTTAGAACCAATAGTTTCACAAATCCATATCAAGAAATTGTAGATGCATATGGTGTTGCAAGATATCAAGAAGTAAATCCTGCAGTTTACACAACTATTATATTCCCATTTCTCTTTGCGGTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGCTGCTTGGAGCATTGGTTCTTATAGCACATGAAAGCAAGCTCAGCAATCAGCGACTAGGAAGCTTTATGGAGATGCTATTTGGTGGACGCTATGTGATTCTATTGATGTCATTATTTTCAATGTATTGTGGGTTAATCTACAATGAATTCTTCTCGGTTCCTTTTCACATATTTGGTGCGTCTGCTTACAAATGCCGAGATATTTCATGCAGGGATGCACATACTACTGGCTTAGTAAAATACAGAGAACCATACCCATTTGGTGTCGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCCTTTCTGAACTCTCTCAAGATGAAGATGTCTATTCTATTTGGTGTGGTGCATATGAACTTAGGAATTATGTTAAGTTATTTCAATGCTCGTTTCTTTGGCAGCTCGCTGGATATAAGGTATCAGTTTGTGCCGCAGATGATTTTCCTTAACAGTCTATTTGGCTATCTTTCCCTTCTCATTGTTCTCAAGTGGTGTACTGGCTCTCAGGCAGACCTTTATCATATAATGATTTACATGTTTTTAAGTCCCTTTGACAATCTTGGTGAGAATGAGTTGTTCTGGGGCCAAAGGCCACTTCAAGTTTTGTTATTGCTTCTGGCTGTAATTGCAGTGCCATGGATGCTCTTTCCAAAGCCTTTTATACTAAAGAAACTTCATAACGAGGTGTTACTTTTTCCTCCCTTATGTTTGGTTTTATTGCTTGAAAGTTGA 2052 0.404 MDHFTDKFPPMDLMRSEKMTFVQLIIPAESAHRAITYLGQLGLLQFRDLNAEKSPFQRTFVNQVKRCAEMSRKLRFLMDQTNKAGIKSSCSVLKSDIYLEDIETQLAEHEHEIIEMNSNSEKLQQAYNELLEFKIVLQKACSFLVSNHGHAVAEERELEENVYSNGDFVETPFLFEQETLPGPSKSNQSGLRFISGIICKSKVLSFERILFRATRGNMLFNQAPADEQIMDPISTEMVEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDITKQRQITREVSSRLTDLEATLDAGIRHRNKALSSVGGHLAKWMDMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPLIAKTQIQEVLQRATFDSNSQVGVIFHSMDALESPPTYFRTNSFTNPYQEIVDAYGVARYQEVNPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIAHESKLSNQRLGSFMEMLFGGRYVILLMSLFSMYCGLIYNEFFSVPFHIFGASAYKCRDISCRDAHTTGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVVHMNLGIMLSYFNARFFGSSLDIRYQFVPQMIFLNSLFGYLSLLIVLKWCTGSQADLYHIMIYMFLSPFDNLGENELFWGQRPLQVLLLLLAVIAVPWMLFPKPFILKKLHNEVLLFPPLCLVLLLES 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03525 683 Coils Coil 99 126 - -
Car06g03525 683 PANTHER VACUOLAR PROTON ATPASE A1 6 669 - -
Car06g03525 683 Pfam V-type ATPase 116kDa subunit family 37 668 IPR002490 GO:0033179|GO:0046961|GO:1902600
Car06g03525 683 PANTHER VACUOLAR PROTON ATPASES 6 669 IPR002490 GO:0033179|GO:0046961|GO:1902600
Car06g03525 683 PIRSF ATP6V0A1 9 670 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03525 Car-Chr6 66265490 66280275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03525 1 668 Primary Pumps ATPases(2) AT2G28520 78.625 0.0 1082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03525 K02154 - gmx:100800799 1194.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03525 06 66265490 66280275 Car06g03525 06 66265490 66280275 ECH
Car01g02468 01 50409662 50420800 Car06g03525 06 66265490 66280275 PCT