Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03522 ATGGATTCTTCTAGTGGACAACACCAGCAAATGTCTAACGAATCATTGGAGAATATGTTGGCTTGTTCGAAAGCACAACAAGACAAAAAACCAAAACCTCAGCCAGAACAAGCTCTAAAATGTCCAAGATGCGACTCATCCAACACCAAATTCTGTTACTACAACAATTACAGTCTTTCTCAACCAAGATATTTCTGCAAATCTTGTAGAAGATATTGGACTAAAGGTGGAACATTAAGAAATGTTCCTGTTGGTGGGGGGTGTAGAAAGAACAAAAGATCATCATCATTAACATCATCGAAAAGGGTTCAAGATCAAACCTTTAACACCAATATTCCAAACCCATTAACTTGTTTCCCTTCATTGTCTTATGACACTAATGATCTCACACTTGCATTAGCTAGGCTTCAAAAGGGTCAACTTGGATTTGAACATGAACATGATTTTTCCAAATTTGGTAACCACACAAGCACAAACACAAACACCTCATGTGACATTCTCAACAATCATGGTTTGAACAACTCCTCCACAAACCAAGGATTCTTAGAAGCACTTATGGGGTCTCAAAATAATGTGTACTATGATAATGTTGGAGTTAGTGGAGAAATGATGTTACCTTATGATCATGAAATGAGCATTGCAACTACTCAAGCAGTGAGTGTCACTACTATGAAACAAGAGATGTGTAATGTTAGGGAACAAAATGAAAATAGGGTGTTGTGGGGTTTTCCATGGCAACTCAATGGAGACACTAACATGAATGAAGTTGAGTCAGGAAGAGCTAGTTGGAATGGTCTCACTCCATCTTGGCATGGCCTTCTCAATAGTCCCTTAATGTAG 840 0.3833 MDSSSGQHQQMSNESLENMLACSKAQQDKKPKPQPEQALKCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSLTSSKRVQDQTFNTNIPNPLTCFPSLSYDTNDLTLALARLQKGQLGFEHEHDFSKFGNHTSTNTNTSCDILNNHGLNNSSTNQGFLEALMGSQNNVYYDNVGVSGEMMLPYDHEMSIATTQAVSVTTMKQEMCNVREQNENRVLWGFPWQLNGDTNMNEVESGRASWNGLTPSWHGLLNSPLM 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03522 279 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 7 278 IPR045174 GO:0003700|GO:0006355
Car06g03522 279 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 7 278 - -
Car06g03522 279 MobiDBLite consensus disorder prediction 1 22 - -
Car06g03522 279 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Car06g03522 279 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
Car06g03522 279 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Car06g03522 279 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03522 Car-Chr6 66220396 66222881 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03522 8 279 C2C2-Dof Transcription Factor Family AT2G28510 41.667 5.31e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car06g03522 zf-Dof 6.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03522 - - gmx:100799737 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03522 06 66220396 66222881 Car06g03522 06 66220396 66222881 ECH