Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03518 ATGGAGTGTAGTGACACTACTAATTCCTCTGCTCCATTTTTTCATTATTCTCCTACTTCCTCATCTTCTTCACCAATACCTCAAGTTGTTATGAGTCCTTGTGCTGCTTGCAAGATTTTGAGGAGAAGATGTGCTGATAAATGTGTTTTAGCTCCTTATTTTCCTCCCACTGAACCTGCTAAGTTTACCATTGCTCATAGAGTATTTGGTGCTAGTAACATCATCAAGTTCCTACAGGAACTTCCAGAGGATCAAAGAGCTGATGCAGTGACAAGCATGGTTTATGAGGCTAGTGCAAGAATAAGAGACCCTGTTTATGGTTGTGCAGGAGCAATTTGCCAACTCCAAAAACAAGTCATAGAGCTTCAAGCACAATTAGCCAAAGCACAAGCAGAGGTTGTAAACATGCAACTCCAACAAGCCAATCTTGTAGCTCTAATTTGCATGGAAATGTCACAAAGTCCACAAGAATCACCACAACAATCATTGGataataataataataatgatgatgatTTCATTAATCCAAGTACTCCATATAGTAGCAACTATCAAATTGGTTTGAACTTCCTTGAGGAGAACTCTTTGTGGGAGCCACTTTGGACATGA 609 0.3875 MECSDTTNSSAPFFHYSPTSSSSSPIPQVVMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPEDQRADAVTSMVYEASARIRDPVYGCAGAICQLQKQVIELQAQLAKAQAEVVNMQLQQANLVALICMEMSQSPQESPQQSLDNNNNNDDDFINPSTPYSSNYQIGLNFLEENSLWEPLWT 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03518 202 Coils Coil 112 139 - -
Car06g03518 202 ProSiteProfiles LOB domain profile. 32 133 IPR004883 -
Car06g03518 202 MobiDBLite consensus disorder prediction 155 176 - -
Car06g03518 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 14 201 - -
Car06g03518 202 Pfam Lateral organ boundaries (LOB) domain 33 130 IPR004883 -
Car06g03518 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 14 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03518 Car-Chr6 66157273 66159173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03518 29 202 AS2 family AT2G28500 65.591 2.09e-77 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car06g03518 LOB 6.2e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03518 06 66157273 66159173 Car06g03518 06 66157273 66159173 ECH
Car06g03518 06 66157273 66159173 Car01g02472 01 50452775 50455060 ECH