Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03496 ATGACAGTGGTGAGAAAAGTTCTTCTCTCATCATCATCATCAATGGCTTCCTCAAACAATTCCATAGCAGAAAACAAGAAATCCAAAAACACAGAAACTTCAACACCCACTAGTAAAATCAAaaaggaaagagacatcgaaaaatcgaaagagaaaaagaaGAATAGTAAGAATAAGAAGCTCAAGCTCAGCAATGGAAATTCCAAAGAACATGAAGAAGATAAAGGAAAGCAACGTGAGCACGAAGTTGAAGAAGGAGGAGGAGAAGGAGAAGAAGAAGCGAAAACGCACGTGTTTCCGATGAATCGAATTAGGACGATTTTAAAAGGTGAAATTAGCGATTTGCGTGTTTCTCAGGAAGCTATATTGGCAATTAACAAAGCTACGGAGAAGTTCCTTGAACAATTGGCGCAGGAAGCTTATGCTTGTTCTGTTCAGAATCGTAAGAAATCATTGAGCTACAATCACCTATCACATGTTGTTAGTAAGCAAAGAAGATATGACTTTCTGTCTGattttgtgcctgagaaagtgaaagctgaggatgcattaagggagacagactcaagagggaatagatga 582 0.3144 MTVVRKVLLSSSSSMASSNNSIAENKKSKNTETSTPTSKIKKERDIEKSKEKKKNSKNKKLKLSNGNSKEHEEDKGKQREHEVEEGGGEGEEEAKTHVFPMNRIRTILKGEISDLRVSQEAILAINKATEKFLEQLAQEAYACSVQNRKKSLSYNHLSHVVSKQRRYDFLSDFVPEKVKAEDALRETDSRGNR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03496 193 MobiDBLite consensus disorder prediction 1 35 - -
Car06g03496 193 MobiDBLite consensus disorder prediction 36 52 - -
Car06g03496 193 Coils Coil 39 59 - -
Car06g03496 193 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 99 161 IPR003958 -
Car06g03496 193 SUPERFAMILY Histone-fold 90 175 IPR009072 GO:0046982
Car06g03496 193 MobiDBLite consensus disorder prediction 63 98 - -
Car06g03496 193 Gene3D Histone, subunit A 50 176 IPR009072 GO:0046982
Car06g03496 193 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR AND ARCHAEAL HISTONE FAMILY PROTEIN, EXPRESSED 19 189 - -
Car06g03496 193 MobiDBLite consensus disorder prediction 1 98 - -
Car06g03496 193 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 19 189 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03496 59 160 CCAAT-HAP5 Transcription Factor Family AT1G07980 38.235 5.01e-17 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Car06g03496 CBFD_NFYB_HMF 2.6e-13 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03496 - K03506 lja:Lj3g3v3086110.3 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03496 06 65858228 65862972 Car06g03496 06 65858228 65862972 ECH