Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03493 ATGAACTTAAGGTCTAAGCTCAAGATGTTAAATAAGACTCTTTCTTTTGCGAAAGCTATGTGGTGCTGTAACTGCTTTGGGTTTATCAAGAGACGGAATCCACAAAAGGTTAAGCCAGCCATCAACAGTAACCTATCTCAGGAGCTGTTGTTGGAGGACGATTTTGATGATGAAGATTCCTTCTGTAATGATGAGGTTAATAACACCACAAGTGGAGATGATAGTGAGGTGCAAAGTCGTCCCAAGCGATCGGAGGATGTTTTGATCTTTAGAGTTGAGAATGACATGATTTGTAGGCAGTTTCCTGTGAAAGAGACTCACAGAGTTGTTCGCACTGAGGATGAAAACGGAAACAAGATGATAAATGAGTATATTCGTGAGTATAAGATTGGTTCTGGTAGCTATGGGAAAGTGGCTCTTTATCAAAGCTCCGTTGATGGAAAACATTATGCAATTAAGGCCTTTCATAAGTCTCATTTACTGAAGCTTCGAGTTGCACCATCTGAAACTGCCATGAGTGATGTTCTACGTGAGGTTTTCATCATGAAAATGCTGGAACATCCCAATATAGTCAATCTCATTGAGGTGATTGATGACCCGGAGTCGGATAACTTCTACATGGTACTTGAATATGTGGAAAGCAAGTGGGTTTGTGAGGGTTCAGGTCCGGCTTGTGCCTTAGGTGAAGAGACTGCCAGGAGATACTTGCGTGATATAGTTTCTGGATTAACATATCTCCATGCTCATAATATAGTACATGGGGATATCAAACCTGATAATCTGCTGGTTACTCGTGATGGTACAGTAAAGATAGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGATGATAATGATATGCTTCGACGATCACCTGGCACTCCTGTTTTCACTGCACCTGAATGTATTTTAGGTATTACATACAGTGGTAAAGCTGCTGATACATGGGCTGTAGGAGTTACTTTATACTGTATGATACTGGGTGAATACCCTTTTCTTGGTGACACACTTCAAGATACATATGACAGAATAGTCAATAATCCCATAGTACTTCCAAAGGGTCTGAATCCACGGTTGAATACTTTAATAGAAGGACTACTGTCCAAAGACCCCAAACAAAGGATGACATTAGGTGATGTGGCGGCAGATAGCTGGGTTATTGGAGATGACGGGCCAATTCCTGAGTATCTTTGTTGGTGCAAGAGGAAGAACTTGGAGAGGGAAGACAATGATGAGAGCAACATGCTTCCTTGA 1251 0.4165 MNLRSKLKMLNKTLSFAKAMWCCNCFGFIKRRNPQKVKPAINSNLSQELLLEDDFDDEDSFCNDEVNNTTSGDDSEVQSRPKRSEDVLIFRVENDMICRQFPVKETHRVVRTEDENGNKMINEYIREYKIGSGSYGKVALYQSSVDGKHYAIKAFHKSHLLKLRVAPSETAMSDVLREVFIMKMLEHPNIVNLIEVIDDPESDNFYMVLEYVESKWVCEGSGPACALGEETARRYLRDIVSGLTYLHAHNIVHGDIKPDNLLVTRDGTVKIGDFSVSQAFEDDNDMLRRSPGTPVFTAPECILGITYSGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDRIVNNPIVLPKGLNPRLNTLIEGLLSKDPKQRMTLGDVAADSWVIGDDGPIPEYLCWCKRKNLEREDNDESNMLP 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03493 416 SUPERFAMILY Protein kinase-like (PK-like) 115 397 IPR011009 -
Car06g03493 416 ProSiteProfiles Protein kinase domain profile. 124 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03493 416 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 9 413 - -
Car06g03493 416 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Car06g03493 416 SMART serkin_6 124 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03493 416 CDD STKc_LKB1_CaMKK 130 385 - -
Car06g03493 416 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 9 413 - -
Car06g03493 416 Gene3D Transferase(Phosphotransferase) domain 1 220 391 - -
Car06g03493 416 Pfam Protein kinase domain 126 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03493 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Car06g03493 416 Gene3D Phosphorylase Kinase; domain 1 118 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03493 Car-Chr6 65830080 65835883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03493 130 384 CBL-interacting serine-threonine protein kinases AT5G35410 32.941 2.43e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Car06g03493 Pkinase 6.3e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03493 K00908 - gmx:100789178 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03493 06 65830080 65835883 Car06g03493 06 65830080 65835883 ECH