Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03485 ATGGCTAAAGATGTTGAGGTTCAAGAACATGGTGAATTCTCAGCTAAAGATTACCAAGATCCACCACCAGCACCATTGATTGATTTTGATGAGTTAACAAAGTGGTCTTTTTATAGAGCTCTTATAGCTGAATTTGTAGCAACACTTTTGTTCCTTTATGTCACAATTTTGACCATTATTGGTTATAGTCATCAGAGTGATCCTAAAGCTGGTGGTACTGATTGTGATGGTGTTGGGATTTTGGGTATTGCTTGGGCTTTTGGTGGCATGATTTTCATCCTTGTTTACTGCACTGCTGGTATTTCTGGAGGGCACATAAATCCGGCAGTGACATTCGGACTATTCGTAGGAAGAAAGGTGTCGTTGCTGAGGGCGGTGTTTTACATGGCAGCGCAGTGTGCCGGTGCGATCTCCGGTACCGGACTAGCAAAGGGTTTCCAAAAAGCATACTTTGACAGGTATGGAGGTGGTGCTAACTTTGTTCATGATGGTTACAACAAAGGTACAGCTTTGGGTGCTGAGATTATTGGTACCTTTGTTCTTGTCTACACTGTCTTCTCTGCCACTGATCCAAAAAGAAACGCTAGGGACTCCCATGTTCCTGTTTTGGCACCACTACCCATTGGATTTGCTGTTTTCATGGTTCACTTGGCTACTATCCCTATTACCGGTACCGGTATTAACCCGGCAAGAAGTTTCGGATCAGCCGTAATCTACAACGAAGGCAAAATTTGGGATGACCAGTGGATATTCTGGGTTGGACCAATTATTGGAGCTACAGTGGCTGCAATATACCACCAATACATTCTTAGAGGATCAGCCATTAAAGCTCTTGGATCCTTCAGAAGCAATGCTTAA 858 0.4347 MAKDVEVQEHGEFSAKDYQDPPPAPLIDFDELTKWSFYRALIAEFVATLLFLYVTILTIIGYSHQSDPKAGGTDCDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFVGRKVSLLRAVFYMAAQCAGAISGTGLAKGFQKAYFDRYGGGANFVHDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGSAVIYNEGKIWDDQWIFWVGPIIGATVAAIYHQYILRGSAIKALGSFRSNA 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03485 285 Gene3D Glycerol uptake facilitator protein. 24 285 IPR023271 -
Car06g03485 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 285 IPR034294 -
Car06g03485 285 CDD MIP 39 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g03485 285 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Car06g03485 285 Pfam Major intrinsic protein 31 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g03485 285 PANTHER AQUAPORIN PIP2-7 1 285 - -
Car06g03485 285 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g03485 285 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g03485 285 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g03485 285 PRINTS Major intrinsic protein family signature 173 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g03485 285 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g03485 285 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g03485 285 TIGRFAM MIP: MIP family channel proteins 43 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g03485 285 SUPERFAMILY Aquaporin-like 31 270 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03485 Car-Chr6 65717405 65719511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03485 1 285 Major Intrinsic Protein MIP AT2G37170 79.298 5.51e-168 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03485 K09872 - gmx:100811119 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03485 06 65717405 65719511 Car06g03485 06 65717405 65719511 ECH
Car06g03485 06 65717405 65719511 Car01g02496 01 50667013 50668878 ECH
Car03g02476 03 70532133 70534078 Car06g03485 06 65717405 65719511 ECH
Car01g02496 01 50667013 50668878 Car06g03485 06 65717405 65719511 PCT