Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03451 ATGAACAAAAGAGAAGGACCTGATAAAATAAGGAAACATGATTTTGTTATAATAATAATAATTGTTGCATTTTTGAGCTGCACTAGTATTGGGCCACAACTAGTTTCTTGTCAGAAAAATTCTGGTGGTTCAGGTGCTGGTGTTGAGATATTTGCCAAGGAATTGTATCGTGGCATGAACAATTATACATCTATCTTCAAAGGTGCAATCAAGAAAGAGTTGGGTTATTGCATTGTTGATTTAGATGCTGATTGGGATGGGGCCTTCAATTTCACCAAAGATCTCACATTTTTGACCATGTGTGCCCAACAAATGAAAGGAGATATTACACAGAGAATGTGCACGGCAGGAGAAATAGAAGCCTATGCAAGAAGTTTTGCTGCAGGGGACAAGTCTGCAGGCTCAGGAAGAACCAAAGCAAACTTCTTGAAGCCCAACATAAACTGTAATTTGAGCTCATGGGTTAATGGATGTGAGCCTGGATGGGGCTGCAAAGCTAATCAGAAAGTTGATATTAATAGTAATAAGAAGGATATACCTGTTAGATCTGCTGATTGCCAACCTTGTTGTGAAGGGTTCTTTTGCCCTCGCGGCATCACCTGCATGATACCTTGTCCTTTGGGCTCTTATTGTCCACGTGGGCAACTCAATAAAACTAGTGGAATATGTGAACCATACCGTTATCAGCTACCACCTGGAAAAGCTAACCATACTTGTGGAGGAGCAGATATTTGGGCCGACATTACTAGTAGTAATGAGGTATTCTTGAAAGATAACAATCCCATTGACCTTTTCTATTTCTCAGGATGTTTTAGGCTAGCAAGTTGTGAACCTAAATCAGCAAATCAAAACATTACTGCATATGGTCTCCTGGTTTTTGCTGGGTTGTGTTTTTTGCTGATCATCATATACAACTGTTCTGATCAAGTTCTTGCAACTCGAGAAAGAAGACAAGCAAAATCAAGAGAAAGGGCAGCTGCAAGTGTAAGAGAAACACAAAATCGCGAAAAATGGAAATCTGCGAAAGACATTGCTAAGAAGCATGCAGTAGGACTACAATCACAATTGTCACGAACATTTTCGCGCAAAAAAACATCGAAGACAGACAATTTGAAAGGTGTGCTACCACCTATTGGACCAGGTTCATCAAAAGGAAAGAAAAAGGATAAAAGCAACCTGACAAAAATAATAAATGATATAGAGCAAGACCCTGATAGTCAAGAAGGGTTCAATGTGGAAATAGGAGATAAAAATGTGAAAAAGCAAGCACCAAGGGGTAAACAGTTGCATACTCAGAGCCAAATTTTCAAGTATGCATATGGTCAGATTGAAAAGGAAAAGGCATTGCAGGAACAGAATAAGAACTTGACATTCTCTGGAGTGATCTCAATGGCTAGTGACGTTGATACAAGAAAGAGACCAACAATTGAGGTTGCTTTTAAAGACTTGACACTCACTTTGAAAGGGAAAAACAAACATCTATTAAGATGTGTGACTGGTAAGTTACATCCTGGAAGAGTTTCTGCTGTCATGGGACCATCTGGGGCTGGTAAGACAACATTTCTTTCTGCTTTAACTGGAAAAGCAGCTGGTTGCCACACAACTGGTCAAGTTCTTGTAAATGGTCAGGAATCGCCTATTCGATCATTTAAGAAGATAATTGGTTTTGTGCCACAAGATGATATTGTCCATGGTAATTTGACAGTGGAGGAGAATCTTTGGTTCAGTGCCAGATGCAGACTCTCTGCCGATCTACCGAAAGAAGAGAAGGTGTTAGTGGTTGAAAGAGTTATTGAGTCCTTAGGTCTGCAGGCGATAAGAGATTCTCTGGTTGGGACGGTAGAGAAACGAGGAATCTCTGGAGGTCAAAGGAAGAGAGTAAATGTTGGACTGGAAATGGTTATGGAACCCTCCCTTCTAATTTTGGATGAACCGACGTCCGGTTTGGACAGTTCATCTTCACAGTTACTGCTTAGAGCACTTAGACGCGAGGCTCTTGAAGGAGTGAACATATGTATGGTCCTTCACCAACCGAGTTACACATTGTTCAAGATGTTTGATGATTTTATACTGCTAGCTAAAGGAGGTCTTACAGTGTATCATGGACCTGTAAACAAAGTGGAAGAGTACTTTTCCGGTATAGGGATTGTTGTACCTGACCGTGTAAACCCTCCAGATTACTACATTGACATTTTAGAAGGAATAATAAAACCAAGTGCAAGCTCAGGAGTAAACCATAAACAACTACCAGTTAGATGGATGCTTCATAATGGATATCCTGTGCCTATGGATATGCTAGAACTTATTGAAGGAATGTCTGCTCCAAGTGGTAATAGTGCAGCACATGGAACATCAGCTAACCCTGCACGACTTACCGCTGCACCTTCTTTTGCCGGAGAACTTTGGCAGGATGTGAAGTGCAATGTTGAGATGAAGAGAGACAACCTTCAACTCAACTTCTTAAGTTCGAACGATTTGTCCAATAGGACTACACCCAGTGCTTTCACACAATACAAATACTTTCTTGGAAGGCAACAGCGGTTGCGAGAAGCTAGAACAATAGCTGTAGATTTTCTGATTTTGCTGCTAGCTGGTGTTTGCTTAGGAACACTTGCCAAAGTGAGTGATGAATCGTTCGGAGCAACTGGTTACACATACACCGTCATTGCAGTATCACTCCTTTCAAAGATTGCAGCTCTGAGATCCTTTTCATTGGATAAGTTGCACTACTGGAGAGAAAGCGCTTCAGGGATGAGTAGCCTTGCATACTTTCTTTCGAAGGACACAGTTGACCATTTCAGTACAATTATCAAACCTCTGGTTTACCTCTCCATGTTCTATTTCTTCAACAATCCAAGATCATCTTTCACAGATAACTACATTGTTCTACTATGTTTAGTGTATTGTGTCACCGGTATAGCTTACGTGTTAGCAATCTTCCTTCAACCAGGCCCAGCTCAGCTGTGGTCAGTGTTACTACCAGTAGTTTTGACTCTTGTAGCAACCTATGATAACGAAGAGGATAGCAAATATGTGGCTTTTCTATCTGACTTGTGCTACACCAAGTGGGCTCTTGAAGCATTTGTAATATCAACTGCTAAAAGATATTCTGGAGTTTGGTTAATAAGTAGATGTGGTGCACTCTATTCATATGGCTATGATCTCAAACATTGGTACCAATGTTTAGGACTCCTTGTTGTGACAGGAATAATTAGTCGCGTACTTGCATTTTTTTGTATGATAACCTTCCAGAAGAAATAG 3261 0.406 MNKREGPDKIRKHDFVIIIIIVAFLSCTSIGPQLVSCQKNSGGSGAGVEIFAKELYRGMNNYTSIFKGAIKKELGYCIVDLDADWDGAFNFTKDLTFLTMCAQQMKGDITQRMCTAGEIEAYARSFAAGDKSAGSGRTKANFLKPNINCNLSSWVNGCEPGWGCKANQKVDINSNKKDIPVRSADCQPCCEGFFCPRGITCMIPCPLGSYCPRGQLNKTSGICEPYRYQLPPGKANHTCGGADIWADITSSNEVFLKDNNPIDLFYFSGCFRLASCEPKSANQNITAYGLLVFAGLCFLLIIIYNCSDQVLATRERRQAKSRERAAASVRETQNREKWKSAKDIAKKHAVGLQSQLSRTFSRKKTSKTDNLKGVLPPIGPGSSKGKKKDKSNLTKIINDIEQDPDSQEGFNVEIGDKNVKKQAPRGKQLHTQSQIFKYAYGQIEKEKALQEQNKNLTFSGVISMASDVDTRKRPTIEVAFKDLTLTLKGKNKHLLRCVTGKLHPGRVSAVMGPSGAGKTTFLSALTGKAAGCHTTGQVLVNGQESPIRSFKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIESLGLQAIRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFKMFDDFILLAKGGLTVYHGPVNKVEEYFSGIGIVVPDRVNPPDYYIDILEGIIKPSASSGVNHKQLPVRWMLHNGYPVPMDMLELIEGMSAPSGNSAAHGTSANPARLTAAPSFAGELWQDVKCNVEMKRDNLQLNFLSSNDLSNRTTPSAFTQYKYFLGRQQRLREARTIAVDFLILLLAGVCLGTLAKVSDESFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESASGMSSLAYFLSKDTVDHFSTIIKPLVYLSMFYFFNNPRSSFTDNYIVLLCLVYCVTGIAYVLAIFLQPGPAQLWSVLLPVVLTLVATYDNEEDSKYVAFLSDLCYTKWALEAFVISTAKRYSGVWLISRCGALYSYGYDLKHWYQCLGLLVVTGIISRVLAFFCMITFQKK 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03451 1086 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Car06g03451 1086 MobiDBLite consensus disorder prediction 320 340 - -
Car06g03451 1086 CDD ABCG_EPDR 476 702 - -
Car06g03451 1086 SMART AAA_5 504 705 IPR003593 -
Car06g03451 1086 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 479 713 IPR027417 -
Car06g03451 1086 ProSitePatterns ABC transporters family signature. 619 633 IPR017871 GO:0005524
Car06g03451 1086 Gene3D - 465 713 IPR027417 -
Car06g03451 1086 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 51 1082 - -
Car06g03451 1086 Pfam ABC-2 type transporter 676 1086 IPR043926 GO:0140359
Car06g03451 1086 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 478 719 IPR003439 GO:0005524
Car06g03451 1086 Pfam ABC transporter 498 647 IPR003439 GO:0005524
Car06g03451 1086 MobiDBLite consensus disorder prediction 361 390 - -
Car06g03451 1086 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 51 1082 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03451 Car-Chr6 64858254 64865605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03451 505 700 Calmodulin-binding Proteins AT2G36910 27.907 1.83e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03451 - - gmx:100794093 1806.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03451 06 64858254 64865605 Car06g03451 06 64858254 64865605 ECH