Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03447 ATGGCTGATATTGAAGGATCACCAGGAAGCTCCATGCATGGAGTAACAGGTCGAGAACAAACCTTCATATCATCAGTCACTTCCCCAACGGTTCCAACTGACACAACAGCCAAATTCGCATTACCAGTTGATTCAGAACACAAATCCAAAGTTTTCAAACTCTTCTCACTAGCAAACCCTCACATGAGAACCTTCCATTTATCATGGATATCTTTTTTCACATGCTTCGTCTCGACTTTCGCCGCGGCGCCATTAGTCCCCATCATTCGCGACAACCTGAACCTAACCAAAGCCGACGTTGGAAACGCCGGCGTGGCTTCGGTTTCAGGTAGTATTTTCTCGAGACTAATAATGGGTGCAGTTTGTGACCTTTTAGGTCCACGTTACGGTTGTGCTTTCCTTATTATGCTCTCTGCTCCAACTGTTTTCTGCATGTCATTTGTGAATGATGCTGCTGGTTACATAGCAGTTAGGTTCATGATTGGTTTTTCTTTGGCAACATTTGTTTCTTGTCAATATTGGATGAGTACTATGTTTAATAGTAAGATTATTGGGTTGGTTAATGGGACTGCTGCTGGTTGGGGTAATATGGGTGGTGGGGCCACTCAACTTATAATGCCTTTGGTTTATGAGTTGATTAGAAGAGCTGGTGCTACTCCTTTTACTGCTTGGAGAATTGCCTTTTTTATCCCTGGTTGGTTGCATGTTATTATGGGGATTTTGGTCTTAACATTAGGACAGGATTTGCCTGATGGTAACCTTGCTGCCTTGCAGAAGAAGGGTAATGTTGCTAAAGACAAGTTCACAAAGGTGTTATGGTATGCCATAACAAATTACAGGACATGGGTTTTTGCTCTCCTATATGGTTACTCTATGGGAGTTGAATTAACCACTGATAATGTCATTGCTGAGTATTTCTATGACAGGTTTAATTTGAAGCTACACACAGCTGGAGTCATTGCAGCATCATTCGGAATGGCGAACCTAGTCGCTCGCCCTTTCGGCGGCTACGCATCAGACGCAGCCGCTAGATTATTCGGCATGAGAGGAAGACTATGGACACTATGGATCCTCCAAACCCTGGGAGGAGTTTTCTGCATATGGTTAGGCCGTGCAAATACACTTCCAATAGCAGTAGTATCCATGATCCTGTTCTCTGTTGGAGCACAAGCAGCATGTGGTGCAACATTTGGCATAATTCCTTTCATTTCAAGAAGGTCTTTAGGGATTATATCAGGTTTAACTGGTGCAGGTGGTAACTTTGGTTCTGGAGTAACACAGTTAGTGTTTTTTTCAAGCTCAAAATTCTCAACTTCAACTGGTCTTTCTTGGATGGGTGCAATGATTGTAGCTTGCACTCTTCCTGTTACACTTGTTCATTTTCCACAGTGGGGTAGCATGTTTTGTCCTCCTTCAAAAGAAGTGAGTGAGGAACATTATTATACTTCTGAATGGAATGAGGAAGAGGTGCAGAAAGGGTTGCATCAGTCCAGTTTGAAGTTTGCAGAGAATAGTCGTTCTGAGAGAGGGAAACGTGTAGCTTCTGCTGCATCACCGCCGGATACAACTCCTAGCCACTACTAA 1584 0.4337 MADIEGSPGSSMHGVTGREQTFISSVTSPTVPTDTTAKFALPVDSEHKSKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKADVGNAGVASVSGSIFSRLIMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVNDAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLVNGTAAGWGNMGGGATQLIMPLVYELIRRAGATPFTAWRIAFFIPGWLHVIMGILVLTLGQDLPDGNLAALQKKGNVAKDKFTKVLWYAITNYRTWVFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGVIAASFGMANLVARPFGGYASDAAARLFGMRGRLWTLWILQTLGGVFCIWLGRANTLPIAVVSMILFSVGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGVTQLVFFSSSKFSTSTGLSWMGAMIVACTLPVTLVHFPQWGSMFCPPSKEVSEEHYYTSEWNEEEVQKGLHQSSLKFAENSRSERGKRVASAASPPDTTPSHY 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03447 527 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 523 - -
Car06g03447 527 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Car06g03447 527 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Car06g03447 527 MobiDBLite consensus disorder prediction 496 527 - -
Car06g03447 527 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Car06g03447 527 SUPERFAMILY MFS general substrate transporter 59 459 IPR036259 -
Car06g03447 527 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 523 IPR044772 GO:0015112
Car06g03447 527 Gene3D MFS general substrate transporter like domains 58 253 IPR036259 -
Car06g03447 527 Gene3D MFS general substrate transporter like domains 264 466 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03447 Car-Chr6 64675077 64677584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03447 1 526 Inorganic Solute Cotransporters AT1G08090 79.584 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03447 K02575 - gmx:100807710 986.482