Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car06g03442 | ATGGCAGCTTCCTCTACTTTACACTTCCTTTCTCGTCTCCGCTTCATTTCTAAACCCCAATCTTTCCCTCTTCCATCACCTTATTCAATCCCATTCAATTTCTCTTTCATCCCCAAATCAAAGAAACCGCATCGATTTCGATTTTTCTCGATGGCTGCTTCGGAATCGAAGGAATCACCGGCTAACAACCCCGGTCTTCATACGACTATTGATGAAGCTACTAAGGGTTACTTTATGCAACAAACTATGTTTAGAATTAAAGACCCCAAAGTTAGCCTTGATTTTTATTCTCGCGTTTTGGGCATGTCtttgcttAAGAGATTGGATTTTCCTGAGATGAAGTTCAGCTTATACTTTATGGGGTATGAGGATACAACAGAAGCTCCAAGTAACCCTGTGGATAGAACAGTTTGGACCTTTGCTCAAAAGGCTACAATTGAATTGACCCATAATTGGGGCACTGAAAGTGATCCAGAGTTCAAAGGGTACCACAATGGCAATTCTGATCCTCGTGGCTTTGGACACATTGGCATAACTGTTGATGACACCTACAAAGCATGTGAAAGATTTCAGAATCTTGGAGTCGAGTTTGTTAAGAAACCAGATGATGGGAAAATGAAAGGGATTGCATTTATTAAGGATCCCGATGGTTACTGGATTGAACTCTTTGACCGGAAAACAATTGGAAATGTAACAGAAGGTAATGCTTGA | 711 | 0.4051 | MAASSTLHFLSRLRFISKPQSFPLPSPYSIPFNFSFIPKSKKPHRFRFFSMAASESKESPANNPGLHTTIDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGIAFIKDPDGYWIELFDRKTIGNVTEGNA | 236 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car06g03442 | 236 | CDD | GlxI_Zn | 79 | 223 | - | - | |
| Car06g03442 | 236 | TIGRFAM | glyox_I: lactoylglutathione lyase | 67 | 230 | IPR004361 | GO:0004462|GO:0046872 | |
| Car06g03442 | 236 | Gene3D | - | 51 | 232 | IPR029068 | - | |
| Car06g03442 | 236 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 78 | 225 | IPR037523 | - | |
| Car06g03442 | 236 | ProSitePatterns | Glyoxalase I signature 2. | 166 | 182 | IPR018146 | GO:0004462|GO:0046872 | |
| Car06g03442 | 236 | PANTHER | LACTOYLGLUTATHIONE LYASE | 44 | 232 | - | - | |
| Car06g03442 | 236 | ProSitePatterns | Glyoxalase I signature 1. | 81 | 102 | IPR018146 | GO:0004462|GO:0046872 | |
| Car06g03442 | 236 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 81 | 222 | IPR004360 | - | |
| Car06g03442 | 236 | PANTHER | LACTOYLGLUTATHIONE LYASE GLYOXALASE I | 44 | 232 | - | - | |
| Car06g03442 | 236 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 67 | 225 | IPR029068 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Car06g03442 | 27 | 236 | Calmodulin-binding Proteins | AT1G08110 | 75.814 | 1.68e-111 | 318 |