Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03427 ATGTTATACCATATTTCACCTTGTTGTTCACTCTCTTGCTTACTCTATTCTATTTCATTTGTAACTTTTCAGATTATATGTTCCTCATGTGACACGGAGCAAGATGTTCAACAGTACTGCATAAACTGTGGAGTATGCATGGGAAAATACTTTTGTGGTATATGCAAATTCTTTGATGATGATATTTCAAAGCAACAATACCACTGTGATGAATGTGGCATCTGCAGAACTGGTGGCAAGGACAACTTTTTCCATTGCAAAATATGTGGATGTTGCTATTCTAAGGTAATCAAAGATGGGCATCATTGTGTAGAAAGAGCAATGCATCATAATTGCCCTATTTGCTTTGAGTATCTGTTTGATACATTACGAGAAATCACCGTTTTGCCTTGCGGGCATACTATACATTTTGAGTGTGTTAAAGAGATGGAACAACATCATAGGTACTCATGTCCTGTTTGCTCAAAATCTATCTGTGATATGTCAAGTGTGTGGAAGAACCTTGATCAAGTGATTTCCACAACTCCAATGCCTATAACATATAAAAATAAGATGGTGTGGATACTGTGCAATGATTGTGGTGTAAACTCCAATGTGCAATTCCACATTGTGGCACATAAGTGTTTAAGTTGCAATTCGTACAACACAAGACAGATACAAGGAGTACCTTCTAGTTCATGTTCCTCTAGGGTTGAAGAGACGGTTAGATGA 711 0.3727 MLYHISPCCSLSCLLYSISFVTFQIICSSCDTEQDVQQYCINCGVCMGKYFCGICKFFDDDISKQQYHCDECGICRTGGKDNFFHCKICGCCYSKVIKDGHHCVERAMHHNCPICFEYLFDTLREITVLPCGHTIHFECVKEMEQHHRYSCPVCSKSICDMSSVWKNLDQVISTTPMPITYKNKMVWILCNDCGVNSNVQFHIVAHKCLSCNSYNTRQIQGVPSSSCSSRVEETVR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03427 236 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RZFP34 24 234 - -
Car06g03427 236 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 184 IPR013083 -
Car06g03427 236 ProSiteProfiles Zinc finger RING-type profile. 112 155 IPR001841 -
Car06g03427 236 SUPERFAMILY RING/U-box 110 160 - -
Car06g03427 236 Coils Coil 231 236 - -
Car06g03427 236 SUPERFAMILY Zinc hairpin stack 48 105 IPR037275 -
Car06g03427 236 Gene3D - 185 225 - -
Car06g03427 236 Pfam Zinc-ribbon 159 217 IPR039512 -
Car06g03427 236 Pfam Ring finger domain 111 154 IPR001841 -
Car06g03427 236 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 24 234 - -
Car06g03427 236 SMART ring_2 112 154 IPR001841 -
Car06g03427 236 ProSiteProfiles Zinc finger CTCHY-type profile. 47 111 IPR017921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03427 Car-Chr6 64345644 64349300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03427 24 220 C2H2 Transcription Factor Family AT3G18290 40.887 3.89e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03427 K10144 - gmx:100812709 414.075