Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03426 ATGGATTTTTATCCAGAGACTCTTGCACACATTAACAATGACTTTGAGCTACACGATTTCATCCAAGATCCCAACTTTGATCAATTCATAAGTTTGATTCGTGGAGAGAATGAAGATACTACTATCTTTAACATAAATTCCGACCTTATCAATGGAAATTTTATTGATAACTCATTCCTTTCATACCCTGCAATTCCATTTGATCAATGCaacaacaataataataataataatTTTGTCACCCCTTTTGATCCAACTTCTTCACTTAGTTCTTTCTCTTGTTTTGATGGAGAAGCCAAAAGGGAAATAGGAGAAGAAAACGATGATGGTGATAATTCTCCAACAACAACTACAAGTGTTGATACTAAGCCAAGGTCAAAAACTGATAGATCCAAGACTTTGATTTCCGAGCGGAGGCGAAGAGTACGAATGAAAGAGAAGCTTTACGCATTGCGTTCTTTGGTTCCCAATATAACTAAGATGGATAAGGCTTCTATCATTGGAGATGCAGTTACATATATGTATGAACTTAAATCACAATCCAAGAAGCTTAAATCTGAGGTTGCAGGACTTGAAGCATCCTTAGCAGTGTCCAAATCTCATCAAGGGTCAATTGAAAGCTCCAAAAAAATTCAATTCAGTAACAATAATGGTTCAATTTGCAAGAAGATTGTCCAGATGGATATGTTTCAAGTGGATGAAAGAGGGTTTTATGTTAAAATAGTGTGCAATAAGGGAGAAAGGGTGGCTGCTTCATTATACAAATCTCTTGAATCTTTGAGAGGCTTCAATATTCAGAATTCAAACTTGGCCACTGTTTCTGCCAATTTTCTACTTACATTTTCATTGAATATGAAAGAGTCTGAACCAGAGATGGATCTGTCCAATTTAAAGCTATGGGTGATTGACGCTTTTCTAAACCAAGGCTTTGAATTCACACCTTCTTTTCGAGTTTGA 957 0.3553 MDFYPETLAHINNDFELHDFIQDPNFDQFISLIRGENEDTTIFNINSDLINGNFIDNSFLSYPAIPFDQCNNNNNNNNFVTPFDPTSSLSSFSCFDGEAKREIGEENDDGDNSPTTTTSVDTKPRSKTDRSKTLISERRRRVRMKEKLYALRSLVPNITKMDKASIIGDAVTYMYELKSQSKKLKSEVAGLEASLAVSKSHQGSIESSKKIQFSNNNGSICKKIVQMDMFQVDERGFYVKIVCNKGERVAASLYKSLESLRGFNIQNSNLATVSANFLLTFSLNMKESEPEMDLSNLKLWVIDAFLNQGFEFTPSFRV 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03426 318 MobiDBLite consensus disorder prediction 123 137 - -
Car06g03426 318 Pfam Helix-loop-helix DNA-binding domain 135 177 IPR011598 GO:0046983
Car06g03426 318 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 11 314 - -
Car06g03426 318 MobiDBLite consensus disorder prediction 102 137 - -
Car06g03426 318 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 128 196 IPR036638 GO:0046983
Car06g03426 318 SMART finulus 134 183 IPR011598 GO:0046983
Car06g03426 318 Gene3D - 120 194 IPR036638 GO:0046983
Car06g03426 318 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 128 177 IPR011598 GO:0046983
Car06g03426 318 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 11 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03426 Car-Chr6 64331870 64334581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03426 13 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 51.757 8.52e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car06g03426 HLH 1.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03426 - - gmx:100805451 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02175 01 47491710 47493830 Car06g03426 06 64331870 64334581 PCT