Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03424 ATGGAAGAGTTTAGCAATGAAGAAAAGTTTGTGGATGCAACCTCCATAGCCAAAGGAAAACGCACCAAAAGGTTGAGATTTTTGTCATCTTGTGGTGTTGCTTCTACTTTAATGACATCAAGCTGCTCAAGtgatgatgaaaatgagtattttgatgatcttgaagaagaagatgatgaagatatgGCTAATTGTTTGATTCTTCTTGCTCAAGGAGGAAGTTACCAAAAGCAACATAGTGGTGGTGGTGATGATGGTAATGACAATAACATAGCTGAAAAGGGTAGTAATGGAAAGAAAAAAATTGCTTTGGGTGGTCATAGAGCAAGTCATAAAAAGCTTAAAATTATGGCTGAGGAAAAAAGAGCGTCTCTCCAGTTGCCAGAGCCAAGATCTTATTTATCACACGATTCGCAACCAATTAAATTGGTTGCGAAGAGTGATGAATTTGAGGAAGGCAAGGAACCTCGTGGTGGACCCACAATTTCTTCTCTTCAAATGGGGAATCATGGTTTGAAAGCTTTTTATGGGAACAAGCACAAGATCCATGAGTGTTCCATTTGTGGATCAGAATTCACATCAGGACAAGCATTGGGTGGACACATGAGGAGGCATAGGACATCCTCGGCGAACGCCTCTATCATCGTAGACAACGATGGAGGCGTTCGGCCGAGGAATATTTTACAATTGGATCTTAATCTTCCAGCTCCAGAAGACGATCTCCGAGAGACAAAGTTTCAATTTCAGACAAAGAACACATCAATGGTGATGTCTGCTTCTCCGACTTTGGTGGGTTGTCATTATTAG 807 0.3891 MEEFSNEEKFVDATSIAKGKRTKRLRFLSSCGVASTLMTSSCSSDDENEYFDDLEEEDDEDMANCLILLAQGGSYQKQHSGGGDDGNDNNIAEKGSNGKKKIALGGHRASHKKLKIMAEEKRASLQLPEPRSYLSHDSQPIKLVAKSDEFEEGKEPRGGPTISSLQMGNHGLKAFYGNKHKIHECSICGSEFTSGQALGGHMRRHRTSSANASIIVDNDGGVRPRNILQLDLNLPAPEDDLRETKFQFQTKNTSMVMSASPTLVGCHY 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03424 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 183 210 IPR013087 -
Car06g03424 268 SUPERFAMILY beta-beta-alpha zinc fingers 180 207 IPR036236 -
Car06g03424 268 MobiDBLite consensus disorder prediction 76 93 - -
Car06g03424 268 MobiDBLite consensus disorder prediction 76 110 - -
Car06g03424 268 Gene3D Classic Zinc Finger 172 215 - -
Car06g03424 268 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 11 97 - -
Car06g03424 268 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 103 268 - -
Car06g03424 268 ProSitePatterns Zinc finger C2H2 type domain signature. 185 205 IPR013087 -
Car06g03424 268 PANTHER ZINC FINGER PROTEIN ZAT5 11 97 - -
Car06g03424 268 PANTHER ZINC FINGER PROTEIN ZAT5 103 268 - -
Car06g03424 268 Pfam C2H2-type zinc finger 183 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03424 Car-Chr6 64312729 64313862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03424 12 268 C2H2 Transcription Factor Family AT2G28200 37.662 4.73e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03424 - - cam:101512661 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02177 01 47532583 47533473 Car06g03424 06 64312729 64313862 PCT