Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03421 ATGCCTCGTCGCGGTGGTGGAAGACATTCCGAGATACGCCATAACCAACCATCGCCGGTTCCGTCTCAACAAACGTCTTCCAATGCAGAAGGATCAGGCCGTGGCGGTGGCTCGCGCGGTGGACATACCGTTCAATATTCTTCTCCGGCGTATCCACCGCCTCCGTCGTCTACTCCGGCGACCTTTGCTCCATCTGTAGCAACGCCTGTTGCTAGTACAAGTTCGTCACCAAGCCTTTCGTCTCCGGCGACGGTTTCATCGGAAAGGCTGAGTTCCGAAGTTGAACAGAAACTTACTCTGCAGACCGCTTCGGTTCCATCGTCGGTGAAAGCTTTAAGGTTCCCTAACCGACCAGGTTTCGGTAGATTGGGAAGGAAAATTCAAGTTCGTGCTAATCATTTTCAGTTGCAAGTCGCTGACAAGGATCTACATCATTACGATGTATCGATTTCGCCGGAGATTGCTTCGAAAAAAGTCTCACGAGATGTAATGAATCAGTTAGTGAAAATGCATCAGGCGACAATGTTAGGTAATCTCATACCTGCCTATGATGGGAGGAAGAGTCTGTTTACTGCTGGTCCATTGCCGTTTACTTCTAAGGTTTTTGTGGTCAACTTGGTTGACGGAAATGGAGGATCATCTTCTGGTTCTACTAAGAAAAAACGTGAACGTGAGTTTAAGGTCACGATACAATTTGCTTCAAAGACTGACATGTTCGGTCTTAATCAGTTTCTCAGTCGTTTGCAGCTTGACTGTCCTTATGAAACCATTCAAGCACTTGATGTTGCTTTGAGAGTGACATCGTCTGAAATGTATACTGTTGCTGGGAGGTCTTTTTTTTCTCCCAGTTTTGGGGCACCGGGGCCTCTTGGCGGTGGGACTGAATTTTACAGAGGATACTATCAAAGCATTAGGCCAACACAGATGGGACTTTCTTTGAATATCGATGTATCATCAAGGGCCTTCTACGAGCCCATTTTGGTGACTGAATTTGTTGCTAAACATTTTAATTTGAATTTATCAAGGCAGCTGTCTGATCAAGATTGTGTTAAGATCAAAAAAGCCTTGCGAGGTGTTAAGGTGCAACTTTCTCATGGAGATGGCATAAGGACTTACAAGATCAACGGTGTTTCAAAAGAACCACTCAGAAACCTAACGTTTACTCTTGATGACCAAATAACAAAGAAAAAAGTTATTGATTATTTCCGTGAGAAGTACAAAATTGAGTTAAAGTATCCAATTCTTCCTGCTCTCCAAGCTGGCAATGACACGAAACCTGTTTATTTTCCAATGGAGCTTTGTCGAATTCAACCTGGTCAGAGGTACTCCAAAAGATTGAATGAAGAACAAGTAACTGCTCTTTTAAGGGCCACCTGTCAGCGTCCTCCTCAGAGGGAAAGTGATATTAAACAGATTGTGAAGCAGCATGGTTTTAAGACAGACAAGGTTGTGCGTGAGTTTGGGATTGATGTTAGGGAGGATCTTGCATTGGTTGATGCCCGTGTTTTGTCCCCCCCAACGCTCAAGTATCACGGAACTGGTGGTGAATCTAAAATTGACCCCAGGATGGGTCAATGGAATATGATTAATAAGAAAATGGTTGATGCTGGCAAGGTTCAATTCTGGAGTTGCATTTGCTTCTCAACAAGAATTAACTCAACAGAATTTTGTGCAGAGTTGATCCGTATGTGTCAAGCAAAGGGAATGCTTTTCAGCCGAGAACCTTTGGTACCTATAACCCAAGCAAATCCGAAACAAATTGAGAGAGAGCTTGTGGAACTTCACAAGCAGTGTAAAACAAGTCTTGATCGCATGAAGCAGGTTGGAAGGCTACAATTATTGATTGTTATTTTGCCTGATTTCAAGGGGAAAGCATATGATTCAATAAAGCGAGTATGTGAAACAGAATTAGGAATAGTGTCACAGTGTGTTCAGCCAAGGCAAGCAGTGAAGATGCAAAAGCAGTATCTTGAAAATTTGTCTCTGAAGATTAATGTCAAGGTTGGTGGTCGTAACACAGTCTTGAATGATGCATTCGAGAAGAAAATTCCTTTGGTAACCGATAAACCAACCATAATATTTGGTGCGGATGTAACACATCCTCAGCCAGGGGAAGACTCAAGTCCTTCTATTGCTGCTGTTGTGGCATCCATGGATTGGCCTTGGGTTACAAAGTACAGAGGAATTGTTTCTACACAGCCTCATCGTGAGGAAATTATCCAGGATCTTTATAAAACAATTGTACATCCTCAGAGAGGAATTGTGCACAGTGGAATGATAAGGGAGTTAATTCTGGCTTTCTATAAAGAGACTAAGTTTAAGCCTGAGCGGATTATATTTTACAGAGATGGAGTAAGTGAGGGACAGTTCAGTCAGGTTTTGCTTTATGAGATGGATGCGATTCGAAAGGCTTGTGTCTCTATAGAGAATGGGTATCTACCTCAAGTTACTTTTGTGGTGGTCCAAAAGAGACATCACACTCGTCTGTTTCCCGTTGGTCGTGATCAGACAGATAGAAGTGGAAATATAATGCCAGGAACCGTGGTAGACACACACATATGCCACCCCAGAGAATTTGACTTTTATCTGAACAGCCATGCTGGTATTCAAGGCACCAGTCGACCAGCACATTATCATGTGTTGTTTGATGAAAATAACTTCAGTGCTGATCAGTTACAGAGTTTAACCAATAATTTATGCTACACGTAA 2709 0.4289 MPRRGGGRHSEIRHNQPSPVPSQQTSSNAEGSGRGGGSRGGHTVQYSSPAYPPPPSSTPATFAPSVATPVASTSSSPSLSSPATVSSERLSSEVEQKLTLQTASVPSSVKALRFPNRPGFGRLGRKIQVRANHFQLQVADKDLHHYDVSISPEIASKKVSRDVMNQLVKMHQATMLGNLIPAYDGRKSLFTAGPLPFTSKVFVVNLVDGNGGSSSGSTKKKREREFKVTIQFASKTDMFGLNQFLSRLQLDCPYETIQALDVALRVTSSEMYTVAGRSFFSPSFGAPGPLGGGTEFYRGYYQSIRPTQMGLSLNIDVSSRAFYEPILVTEFVAKHFNLNLSRQLSDQDCVKIKKALRGVKVQLSHGDGIRTYKINGVSKEPLRNLTFTLDDQITKKKVIDYFREKYKIELKYPILPALQAGNDTKPVYFPMELCRIQPGQRYSKRLNEEQVTALLRATCQRPPQRESDIKQIVKQHGFKTDKVVREFGIDVREDLALVDARVLSPPTLKYHGTGGESKIDPRMGQWNMINKKMVDAGKVQFWSCICFSTRINSTEFCAELIRMCQAKGMLFSREPLVPITQANPKQIERELVELHKQCKTSLDRMKQVGRLQLLIVILPDFKGKAYDSIKRVCETELGIVSQCVQPRQAVKMQKQYLENLSLKINVKVGGRNTVLNDAFEKKIPLVTDKPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPWVTKYRGIVSTQPHREEIIQDLYKTIVHPQRGIVHSGMIRELILAFYKETKFKPERIIFYRDGVSEGQFSQVLLYEMDAIRKACVSIENGYLPQVTFVVVQKRHHTRLFPVGRDQTDRSGNIMPGTVVDTHICHPREFDFYLNSHAGIQGTSRPAHYHVLFDENNFSADQLQSLTNNLCYT 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03421 902 MobiDBLite consensus disorder prediction 61 90 - -
Car06g03421 902 MobiDBLite consensus disorder prediction 15 33 - -
Car06g03421 902 ProSiteProfiles Piwi domain profile. 613 902 IPR003165 GO:0003676
Car06g03421 902 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 67 902 - -
Car06g03421 902 SMART DUF1785_2 273 325 IPR014811 -
Car06g03421 902 CDD PAZ_argonaute_like 328 436 - -
Car06g03421 902 Pfam N-terminal domain of argonaute 125 264 IPR032474 -
Car06g03421 902 PANTHER PROTEIN ARGONAUTE 1D 67 902 - -
Car06g03421 902 Pfam PAZ domain 347 454 IPR003100 GO:0005515
Car06g03421 902 Gene3D - 683 902 IPR036397 GO:0003676
Car06g03421 902 SMART PAZ_2_a_3 330 458 IPR003100 GO:0005515
Car06g03421 902 SMART Piwi_a_2 613 902 IPR003165 GO:0003676
Car06g03421 902 CDD Piwi_ago-like 482 902 IPR045246 -
Car06g03421 902 ProSiteProfiles PAZ domain profile. 326 438 IPR003100 GO:0005515
Car06g03421 902 SUPERFAMILY PAZ domain 126 475 IPR036085 GO:0005515
Car06g03421 902 MobiDBLite consensus disorder prediction 1 90 - -
Car06g03421 902 Gene3D paz domain 320 442 - -
Car06g03421 902 Pfam Argonaute linker 1 domain 276 324 IPR014811 -
Car06g03421 902 Pfam Piwi domain 614 902 IPR003165 GO:0003676
Car06g03421 902 Pfam Argonaute linker 2 domain 464 510 IPR032472 -
Car06g03421 902 Pfam Mid domain of argonaute 521 596 IPR032473 -
Car06g03421 902 Gene3D - 502 677 - -
Car06g03421 902 SUPERFAMILY Ribonuclease H-like 610 901 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03421 Car-Chr6 64259550 64265555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03421 57 902 Eukaryotic Initiation Factors Gene Family AT1G48410 55.659 0.0 948
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03421 K11593 - gmx:100805246 1113.6